RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 SH3BP5O60239 455 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 CBFA2T3O75081 653 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 LRCH4O75427 683 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 RNF8O76064 485 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 CASP14P31944 242 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 PCK1P35558 622 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 RECQLP46063 649 aaPredicted RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 HCAR3P49019 387 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 SHC2P98077 582 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 CCDC15Q0P6D6 951 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 SERINC3Q13530 473 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 HNRNPDQ14103 355 aaKnown RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 PARP15Q460N3 678 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 INO80DQ53TQ3 878 aaPredicted RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 ERN2Q76MJ5 926 aaKnown RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 SLC6A18Q96N87 628 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 SNRNP25Q9BV90 132 aaKnown RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 LRRC19Q9H756 370 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 PREBQ9HCU5 417 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 TM7SF3Q9NS93 570 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 PCSK1NQ9UHG2 260 aa17.6■□□□□ 0.41
CTNS-207ENST00000495445 FNDC3AQ9Y2H6 1198 aaKnown RBP17.6■□□□□ 0.41
CTNS-207ENST00000495445 CABIN1Q9Y6J0 2220 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 RASA4BC9J798 803 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 KPNA3O00505 521 aaPredicted RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 RASA4O43374 803 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 GSRP00390 522 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 CYP1A2P05177 515 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 CD38P28907 300 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 CCNHP51946 323 aaPredicted RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 NDST2P52849 883 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 FAM193AP78312 1265 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 ALKBH5Q6P6C2 394 aaKnown RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 LAYNQ6UX15 382 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 VPS36Q86VN1 386 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 CASKIN2Q8WXE0 1202 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 HMCESQ96FZ2 354 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 LRIG1Q96JA1 1093 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTNS-207ENST00000495445 TSPY26PQ9H489 355 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 DONSONQ9NYP3 566 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 MYO1AQ9UBC5 1043 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 HECAQ9UBI9 543 aaPredicted RBP17.59■□□□□ 0.41
CTNS-207ENST00000495445 DMTF1Q9Y222 760 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 DOCK9Q9BZ29 2069 aa17.59■□□□□ 0.41
CTNS-207ENST00000495445 PRPSAP2O60256 369 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 DFNA5O60443 496 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 POP4O95707 220 aaKnown RBP17.58■□□□□ 0.4
CTNS-207ENST00000495445 TPM3P06753 285 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 ITGB7P26010 798 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 DNA2P51530 1060 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 ZNF135P52742 658 aaPredicted RBP17.58■□□□□ 0.4
CTNS-207ENST00000495445 TPI1P60174 286 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 ASTE1Q2TB18 679 aaPredicted RBP17.58■□□□□ 0.4
CTNS-207ENST00000495445 MYLK3Q32MK0 819 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 NIPA2Q8N8Q9 360 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 OR2AP1Q8NGE2 309 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 SERAC1Q96JX3 654 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 CAMK1GQ96NX5 476 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 DNAJC7Q99615 494 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 THAP2Q9H0W7 228 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.4
CTNS-207ENST00000495445 MFHAS1Q9Y4C4 1052 aa17.58■□□□□ 0.4
CTNS-207ENST00000495445 EEF2KO00418 725 aaKnown RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 KCNK3O14649 394 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 BUB1O43683 1085 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 RNGTTO60942 597 aaKnown RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 KCNA4P22459 653 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 IL1R2P27930 398 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 SNRPD1P62314 119 aaKnown RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 PIGHQ14442 188 aaPredicted RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 CYTH1Q15438 398 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 BOLA3Q53S33 107 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 SPECC1LQ69YQ0 1117 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 NAPEPLDQ6IQ20 393 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 LEKR1Q6ZMV7 388 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 IQCHQ86VS3 1027 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 NAXDQ8IW45 347 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 MFSD2AQ8NA29 543 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 BAHD1Q8TBE0 780 aaPredicted RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 GRIN3AQ8TCU5 1115 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 SKA1Q96BD8 255 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 PPP1R16AQ96I34 528 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 TM6SF2Q9BZW4 377 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 SLC39A8Q9C0K1 460 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 PDFQ9HBH1 243 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 DYRK4Q9NR20 520 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 CWC15Q9P013 229 aaKnown RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 PCOLCE2Q9UKZ9 415 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 ZFR2Q9UPR6 939 aaKnown RBP17.57■□□□□ 0.4
CTNS-207ENST00000495445 FRYQ5TBA9 3013 aa17.57■□□□□ 0.4
CTNS-207ENST00000495445 H0Y8X5 98 aa17.56■□□□□ 0.4
CTNS-207ENST00000495445 TLR4O00206 839 aa17.56■□□□□ 0.4
CTNS-207ENST00000495445 AP1G1O43747 822 aa17.56■□□□□ 0.4
CTNS-207ENST00000495445 PCDHGA12O60330 932 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms