RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TBC1D3L	B9A6J9	549 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	YKT6	O15498	198 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	MAGEC1	O60732	1142 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	LEFTY1	O75610	366 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	RNF8	O76064	485 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	DKK1	O94907	266 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	POP4	O95707	220 aa	Known RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	GYPC	P04921	128 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TPM3	P06753	285 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TBC1D3H	P0C7X1	549 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	PSMA2	P25787	234 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	RXRG	P48443	463 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	CCNH	P51946	323 aa	Predicted RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	PPP2CB	P62714	309 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	PPP2CA	P67775	309 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	SERINC3	Q13530	473 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	SUZ12	Q15022	739 aa	Known RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	ERMARD	Q5T6L9	678 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TBC1D3G	Q6DHY5	549 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TBC1D3C	Q6IPX1	549 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	SCYL2	Q6P3W7	929 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	ERN2	Q76MJ5	926 aa	Known RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	VPS36	Q86VN1	386 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	PYROXD2	Q8N2H3	581 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	OXR1	Q8N573	874 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	NIPA2	Q8N8Q9	360 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	CHST14	Q8NCH0	376 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	OR2AP1	Q8NGE2	309 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	OR2I1P	Q8NGU4	316 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	RAB7B	Q96AH8	199 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	ARRDC3	Q96B67	414 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	OSBPL1A	Q9BXW6	950 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	LRRC19	Q9H756	370 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	CNOT8	Q9UFF9	292 aa	Known RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	DNAI1	Q9UI46	699 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	NENF	Q9UMX5	172 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	AP4E1	Q9UPM8	1137 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	LUC7L2	Q9Y383	392 aa	Known RBP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	FRY	Q5TBA9	3013 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TMEM131	Q92545	1883 aa		10.47	□□□□□ -0.73
NEPRO-222	ENST00000494891	TP53BP1	Q12888	1972 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	FAM47DP	A6NHR8	397 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	TMCO5B	A8MYB1	307 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	PRAMEF26	H0Y7S4	382 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	KPNA3	O00505	521 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SH3BP5	O60239	455 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	LRCH4	O75427	683 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	WNT1	P04628	370 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	NUMB	P49757	651 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	CCT8	P50990	548 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	NEK3	P51956	506 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	C21orf59	P57076	290 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	NXPH1	P58417	271 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SNRPD1	P62314	119 aa	Known RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	PIGH	Q14442	188 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	TRIP6	Q15654	476 aa	Known RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	TMEM259	Q4ZIN3	620 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SETMAR	Q53H47	684 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	BOLA3	Q53S33	107 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SLC45A4	Q5BKX6	768 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	ARSI	Q5FYB1	569 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	KCNT1	Q5JUK3	1230 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	AFMID	Q63HM1	303 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	KIAA1161	Q6NSJ0	714 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	HORMAD1	Q86X24	394 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	TMEM145	Q8NBT3	493 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	HCAR2	Q8TDS4	363 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	ASB12	Q8WXK4	309 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SERAC1	Q96JX3	654 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	SLC6A18	Q96N87	628 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	PEBP4	Q96S96	227 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	ELF4	Q99607	663 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	CDC6	Q99741	560 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	CPEB1	Q9BZB8	566 aa	Known RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	KLC2	Q9H0B6	622 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	TNKS2	Q9H2K2	1166 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	IL21R	Q9HBE5	538 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	DYRK4	Q9NR20	520 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	IFNK	Q9P0W0	207 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	HECA	Q9UBI9	543 aa	Predicted RBP	10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	NEUROG3	Q9Y4Z2	214 aa		10.46	□□□□□ -0.73
NEPRO-222	ENST00000494891	DOCK9	Q9BZ29	2069 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	TRPM6	Q9BX84	2022 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	RASA4B	C9J798	803 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891		H0Y8X5	98 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	TLR4	O00206	839 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	RNF103	O00237	685 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	PLK4	O00444	970 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	WNT9A	O14904	365 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	ATMIN	O43313	823 aa	Predicted RBP	10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	RASA4	O43374	803 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	CREB3	O43889	395 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	PRPSAP2	O60256	369 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	CYP1A2	P05177	515 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	SKIL	P12757	684 aa		10.45	□□□□□ -0.74
NEPRO-222	ENST00000494891	ADRB3	P13945	408 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms