RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FGL2Q14314 439 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 DPY19L2P1Q6NXN4 242 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 Q6ZSR6 202 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.34
SKA1-205ENST00000494518 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 RYBPQ8N488 228 aaPredicted RBP12.9□□□□□ -0.34
SKA1-205ENST00000494518 EMC1Q8N766 993 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
SKA1-205ENST00000494518 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 APOLD1Q96LR9 279 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
SKA1-205ENST00000494518 TM6SF2Q9BZW4 377 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 RRN3Q9NYV6 651 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 ITM2BQ9Y287 266 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 A6NNZ2 444 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 ADRB3P13945 408 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 ACVRL1P37023 503 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 SERPINH1P50454 418 aaKnown RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 NEK3P51956 506 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 ATP11AP98196 1134 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 E2F1Q01094 437 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 CCDC15Q0P6D6 951 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 CDO1Q16878 200 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 SLC25A52Q3SY17 297 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 MIIPQ5JXC2 388 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 NAA35Q5VZE5 725 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 CPA5Q8WXQ8 436 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 FGF11Q92914 225 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 NT5C3BQ969T7 300 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 PGAP3Q96FM1 320 aaPredicted RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 BMFQ96LC9 184 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 SLC17A9Q9BYT1 436 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 METTL5Q9NRN9 209 aaKnown RBP12.89□□□□□ -0.35
SKA1-205ENST00000494518 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 PAXBP1Q9Y5B6 917 aa12.89□□□□□ -0.35
SKA1-205ENST00000494518 PIEZO2Q9H5I5 2752 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 IGLV3-10A0A075B6K4 115 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 LY6G6EA0A0G2JKS1 128 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 OPA1O60313 960 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CSO75390 466 aaKnown RBP12.88□□□□□ -0.35
SKA1-205ENST00000494518 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 C1QL1O75973 258 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 GJB6O95452 261 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 F9P00740 461 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 MMEP08473 750 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 ALPPL2P10696 532 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CKMT1AP12532 417 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
SKA1-205ENST00000494518 ACTN2P35609 894 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 ABL2P42684 1182 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 GABRB2P47870 512 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 BPIFB4P59827 614 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CXADRP78310 365 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 GABREP78334 506 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 GNA12Q03113 381 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 FZD2Q14332 565 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CARD16Q5EG05 197 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 LRRC73Q5JTD7 316 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 RETSATQ6NUM9 610 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 CRTC1Q6UUV9 634 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 SPACA3Q8IXA5 215 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 NETO2Q8NC67 525 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 LGMNQ99538 433 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 TUBGCP2Q9BSJ2 902 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 ZYG11BQ9C0D3 744 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 NDFIP2Q9NV92 336 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 HECAQ9UBI9 543 aaPredicted RBP12.88□□□□□ -0.35
SKA1-205ENST00000494518 FADS3Q9Y5Q0 445 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 U3KQA8 63 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
SKA1-205ENST00000494518 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 K7ESM1 405 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 USP12O75317 370 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 ITGB7P26010 798 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 L1CAMP32004 1257 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 UBE2HP62256 183 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms