RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 WNT3AP56704 352 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 MGAT2Q10469 447 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ST3GAL1Q11201 340 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 DMP1Q13316 513 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PDIA5Q14554 519 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 CSRP2Q16527 193 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 IL17AQ16552 155 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PGS1Q32NB8 556 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 COBLL1Q53SF7 1204 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 C19orf54Q5BKX5 351 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 N4BP2L1Q5TBK1 243 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 CENPPQ6IPU0 288 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF280DQ6N043 979 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 DSTYKQ6XUX3 929 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 C1orf186Q6ZWK4 172 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 USP37Q86T82 979 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 LONP2Q86WA8 852 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 LGI4Q8N135 537 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 TTC9BQ8N6N2 239 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ATAD1Q8NBU5 361 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PIK3C3Q8NEB9 887 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 GPR156Q8NFN8 814 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 DEPDC1BQ8WUY9 529 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 C8orf76Q96K31 380 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 NTPCRQ9BSD7 190 aaKnown RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 GPR88Q9GZN0 384 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 SLC6A15Q9H2J7 730 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ANKFY1Q9P2R3 1169 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 COMMD10Q9Y6G5 202 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PDCD11Q14690 1871 aaKnown RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 KIF26AQ9ULI4 1882 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 MYH11P35749 1972 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF638Q14966 1978 aaKnown RBP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ANK1P16157 1881 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CFAP47Q6ZTR5 3102 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MYBPHLA2RUH7 354 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 PMS2P1A4D2B8 440 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 C2orf78A6NCI8 922 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 FAM171A2A8MVW0 826 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 LACTBL1A8MY62 500 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 M0QZQ0 153 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 PPEF2O14830 753 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CLDN3O15551 220 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 PRAMEF4O60810 478 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 LRP3O75074 770 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 TOM1L1O75674 476 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 UBXN7O94888 489 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 LDHAP00338 332 aaKnown RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CXCL8P10145 99 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MUTP22033 750 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CTSSP25774 331 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 GABRR2P28476 465 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CNR2P34972 360 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 TNFSF9P41273 254 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 KIR2DL3P43628 341 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 TOB1P50616 345 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 DSC2Q02487 901 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 YWHAHQ04917 246 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 FCHO2Q0JRZ9 810 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MAPK7Q13164 816 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 GPR17Q13304 367 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 BRD3Q15059 726 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 ZBTB6Q15916 424 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 AASDHQ4L235 1098 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 GAGE13Q4V321 117 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 DGKKQ5KSL6 1271 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 KRT79Q5XKE5 535 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 HAUS3Q68CZ6 603 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 KBTBD6Q86V97 674 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 RALGPS2Q86X27 583 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 TMC8Q8IU68 726 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 CCDC83Q8IWF9 413 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 LEMD2Q8NC56 503 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 TMEM161BQ8NDZ6 487 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 BEST2Q8NFU1 509 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 FBXO18Q8NFZ0 1043 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 SNX33Q8WV41 574 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MMTAG2Q9BU76 263 aaKnown RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 SLC46A2Q9BY10 475 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 B3GNT5Q9BYG0 378 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 FOXP1Q9H334 677 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 C8orf33Q9H7E9 229 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MSL2Q9HCI7 577 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 FBRSL1Q9HCM7 1045 aaKnown RBP5.54□□□□□ -1.52
PTCD3-219ENST00000494323 GKN1Q9NS71 199 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 MAFFQ9ULX9 164 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 YIPF1Q9Y548 306 aa5.54□□□□□ -1.52
PTCD3-219ENST00000494323 PHLPP2Q6ZVD8 1323 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 CEP295Q9C0D2 2601 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 PCNX2A6NKB5 2137 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 TTC26A0AVF1 554 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 MTMR11A4FU01 709 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 FAM227AF5H4B4 570 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 DCLK1O15075 740 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 AKR1B10O60218 316 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 RPP40O75818 363 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms