RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SPINT1O43278 529 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 KDELR3O43731 214 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 CREB3O43889 395 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
HSPG2-212ENST00000493940 ZNF883P0CG24 379 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 PRLRP16471 622 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 ITIH2P19823 946 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 CD38P28907 300 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 MAPKAPK2P49137 400 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 DNA2P51530 1060 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-212ENST00000493940 BNIP3Q12983 259 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 CARD16Q5EG05 197 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 FIGNQ5HY92 759 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-212ENST00000493940 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 MARCH9Q86YJ5 346 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 GATAD2AQ86YP4 633 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 CPNE8Q86YQ8 564 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 RTL3Q8N8U3 475 aaKnown RBP12.85□□□□□ -0.35
HSPG2-212ENST00000493940 HMCESQ96FZ2 354 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 SERAC1Q96JX3 654 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 MYOCQ99972 504 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 ISCUQ9H1K1 167 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 MAGEH1Q9H213 219 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 SLC32A1Q9H598 525 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 FZD3Q9NPG1 666 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 AASDHPPTQ9NRN7 309 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 PCSK1NQ9UHG2 260 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 MFHAS1Q9Y4C4 1052 aa12.85□□□□□ -0.35
HSPG2-212ENST00000493940 LRP4O75096 1905 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 ATRXP46100 2492 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 WASH4PA8MWX3 477 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 INSIG1O15503 277 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 SLC7A4O43246 635 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 CER1O95813 267 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 ATXN1LP0C7T5 689 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 GZMAP12544 262 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 IL1R2P27930 398 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 EPHB2P29323 1055 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 MIPP30301 263 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 ABL2P42684 1182 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 CLCN6P51797 869 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 UBASH3AP57075 661 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 SLC20A2Q08357 652 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 KLHL30Q0D2K2 578 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 CYTH1Q15438 398 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 SEL1L3Q68CR1 1132 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 TXNRD3NBQ6F5E7 133 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 DCUN1D2Q6PH85 259 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 PARS2Q7L3T8 475 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 KANSL1Q7Z3B3 1105 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 TRIM69Q86WT6 500 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 RHBDD1Q8TEB9 315 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 SETD7Q8WTS6 366 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 GATA6Q92908 595 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 BTBD6Q96KE9 485 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 NSMCE3Q96MG7 304 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 KCTD15Q96SI1 283 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 HEPHQ9BQS7 1158 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 SNRNP25Q9BV90 132 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 EDEM3Q9BZQ6 932 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 PARVAQ9NVD7 372 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 MYO1AQ9UBC5 1043 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 HECAQ9UBI9 543 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
HSPG2-212ENST00000493940 RP1P56715 2156 aa12.84□□□□□ -0.35
HSPG2-212ENST00000493940 A0A087X0T9 212 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 A0A1B0GTQ1 180 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RASA4BC9J798 803 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 J3KR12 359 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 TLR4O00206 839 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RAD51BO15315 384 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 SLC31A1O15431 190 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RASA4O43374 803 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RAMP2O60895 175 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 LRCH4O75427 683 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 GYPCP04921 128 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 CCDC172P0C7W6 258 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 FTH1P19P0C7X4 201 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 FAM228BP0C875 321 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 PSMA2P25787 234 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 CLDN2P57739 230 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 NXPH1P58417 271 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 SERINC3Q13530 473 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 TEAD4Q15561 434 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 EFHC2Q5JST6 749 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 NAPEPLDQ6IQ20 393 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RETSATQ6NUM9 610 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms