RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 Q6ZSV7 163 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 MEPCEQ7L2J0 689 aaKnown RBP4.57□□□□□ -1.68
ITGB1-216ENST00000493758 CTU1Q7Z7A3 348 aaKnown RBP4.57□□□□□ -1.68
ITGB1-216ENST00000493758 RBFAQ8N0V3 343 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 FBXL14Q8N1E6 418 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 LSM14AQ8ND56 463 aaKnown RBP4.57□□□□□ -1.68
ITGB1-216ENST00000493758 ELP5Q8TE02 316 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 RAB40AQ8WXH6 277 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 STN1Q9H668 368 aaKnown RBP4.57□□□□□ -1.68
ITGB1-216ENST00000493758 IL36RNQ9UBH0 155 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 DGKBQ9Y6T7 804 aa4.57□□□□□ -1.68
ITGB1-216ENST00000493758 A0A096LPK6 155 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 BECN2A8MW95 431 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 EBAG9O00559 213 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 ADAP00813 363 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 HOXD3P31249 432 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CCKBRP32239 447 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CDKN2AP42771 156 aaKnown RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 RFX5P48382 616 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CCT5P48643 541 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CDH12P55289 794 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 SLC18A2Q05940 514 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 TRAF1Q13077 416 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 SHBQ15464 509 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 ZNF284Q2VY69 593 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 SLC4A8Q2Y0W8 1093 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 SH2D4BQ5SQS7 431 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 UBAP2Q5T6F2 1119 aaKnown RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 Q6ZTK2 550 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 LRRTM4Q86VH4 590 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 IQCF1Q8N6M8 205 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 ANKRD42Q8N9B4 389 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 MCPH1Q8NEM0 835 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CEP76Q8TAP6 659 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 TMEM18Q96B42 140 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 MEIS3Q99687 375 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CLSTN3Q9BQT9 956 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 REEP2Q9BRK0 252 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CXorf56Q9H5V9 222 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 CD93Q9NPY3 652 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 TLR8Q9NR97 1041 aaKnown RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 MYO6Q9UM54 1294 aa4.56□□□□□ -1.68
ITGB1-216ENST00000493758 SRPRBQ9Y5M8 271 aaKnown RBP4.56□□□□□ -1.68
ITGB1-216ENST00000493758 LACTBL1A8MY62 500 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 FAM157AC9JC47 383 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 INAFM1C9JVW0 142 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 IKBKBO14920 756 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 CTPS1P17812 591 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 RXRAP19793 462 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ABATP80404 500 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ADORA2A-AS1P86434 159 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ZXDBP98169 803 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 CRYZQ08257 329 aaKnown RBP4.55□□□□□ -1.68
ITGB1-216ENST00000493758 DSC1Q08554 894 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 FAM27E3Q08E93 113 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ME3Q16798 604 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 NAA35Q5VZE5 725 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 NAPEPLDQ6IQ20 393 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 OIT3Q8WWZ8 545 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ZSCAN31Q96LW9 406 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-216ENST00000493758 COG8Q96MW5 612 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 NTPCRQ9BSD7 190 aaKnown RBP4.55□□□□□ -1.68
ITGB1-216ENST00000493758 LMAN2LQ9H0V9 348 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 HIPK2Q9H2X6 1198 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ENTPD7Q9NQZ7 604 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 PLEKHB1Q9UF11 243 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-216ENST00000493758 CDH22Q9UJ99 828 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 ZNF580Q9UK33 172 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 CNPY2Q9Y2B0 182 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 SLC45A1Q9Y2W3 748 aa4.55□□□□□ -1.68
ITGB1-216ENST00000493758 GOLGA6L10A0A0M3HER8 536 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 C17orf113A0A1B0GUU1 675 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 DDTLA6NHG4 134 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 CBY3A6NI87 242 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 NGFRP08138 427 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 TKTP29401 623 aaKnown RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 MLH1P40692 756 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 PTPN9P43378 593 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 CCR5P51681 352 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 VAMP2P63027 116 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 UBE3AQ05086 875 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 CHRNDQ07001 517 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 ST3GAL1Q11201 340 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 HNF4GQ14541 408 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 DHX8Q14562 1220 aaKnown RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 SLC18A3Q16572 532 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 WDR45BQ5MNZ6 344 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 C17orf99Q6UX52 265 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 FAM83HQ6ZRV2 1179 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 SPATA2LQ8IUW3 424 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 CPOQ8IVL8 374 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 THOC3Q96J01 351 aaKnown RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 APOLD1Q96LR9 279 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 POLDIP3Q9BY77 421 aaKnown RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 EPHX3Q9H6B9 360 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 PPCSQ9HAB8 311 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 WDR6Q9NNW5 1121 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms