RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SRPK1Q96SB4 655 aaKnown RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PITPNM3Q9BZ71 974 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 GKN1Q9NS71 199 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 STOML2Q9UJZ1 356 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PRDM4Q9UKN5 801 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 H3BNC9 293 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 CNPP09543 421 aaKnown RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 CRHR1P34998 444 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ACVRL1P37023 503 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ITKQ08881 620 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 IFT88Q13099 833 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 LBRQ14739 615 aaKnown RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 TEDDM1Q5T9Z0 273 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PDPK2PQ6A1A2 396 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 SETD3Q86TU7 594 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 KCNMB4Q86W47 210 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ZNF75CPQ92670 426 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 TADA1Q96BN2 335 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 KLHL5Q96PQ7 755 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PLCD4Q9BRC7 762 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ATP13A1Q9HD20 1204 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 NSMCE4AQ9NXX6 385 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PRKAG2Q9UGJ0 569 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 AGO1Q9UL18 857 aaKnown RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PLLPQ9Y342 182 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 USP15Q9Y4E8 981 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-216ENST00000492977 PSAT1Q9Y617 370 aa14.25□□□□□ -0.13
PTPN7-216ENST00000492977 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 ILVBLA1L0T0 632 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 TGM5O43548 720 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 CXCL14O95715 111 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 MBL2P11226 248 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 NMBRP28336 390 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 CSE1LP55060 971 aaKnown RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 RPS24P62847 133 aaKnown RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 FPGSQ05932 587 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 ZNF177Q13360 481 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 LILRA6Q6PI73 481 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 SPATA21Q7Z572 469 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 SRLQ86TD4 932 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 NDUFAF2Q8N183 169 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 BBS5Q8N3I7 341 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 FAM111AQ96PZ2 611 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 RBBP8Q99708 897 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 PRKD2Q9BZL6 878 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 ZMYND15Q9H091 742 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 ZNF334Q9HCZ1 680 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 C20orf96Q9NUD7 363 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 PRKAG3Q9UGI9 489 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
PTPN7-216ENST00000492977 STARD13Q9Y3M8 1113 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 TCAF1Q9Y4C2 921 aa14.24□□□□□ -0.13
PTPN7-216ENST00000492977 A0A1B0GVM2 712 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 TCAF2A6NFQ2 919 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 KDELR3O43731 214 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 OLFM2O95897 454 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 ADH1AP07327 375 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 MMP2P08253 660 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 CD86P42081 329 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 PDE1BQ01064 536 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 POU6F1Q14863 301 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 ZKSCAN8Q15776 578 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-216ENST00000492977 HSP90AA5PQ58FG0 334 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 STRA8Q7Z7C7 330 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 UBE2Q1Q7Z7E8 422 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 KLHL23Q8NBE8 558 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 ARRDC2Q8TBH0 407 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 PRICKLE1Q96MT3 831 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-216ENST00000492977 SLC13A1Q9BZW2 595 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 FAM117AQ9C073 453 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 POLR1EQ9GZS1 481 aaKnown RBP14.23□□□□□ -0.13
PTPN7-216ENST00000492977 MANSC1Q9H8J5 431 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 IL1RAPL1Q9NZN1 696 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 SLC17A6Q9P2U8 582 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
PTPN7-216ENST00000492977 A0A0D9SEW6 157 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
PTPN7-216ENST00000492977 ALDOAP04075 364 aaKnown RBP14.22□□□□□ -0.13
PTPN7-216ENST00000492977 SPATA31D3P0C874 917 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 IRF1P10914 325 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 PAMP19021 973 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-216ENST00000492977 CA8P35219 290 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 ETFBP38117 255 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 HADHAP40939 763 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 SERPINB4P48594 390 aa14.22□□□□□ -0.13
PTPN7-216ENST00000492977 LIMK2P53671 638 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms