RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CSPG5O95196 566 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ASMTLO95671 621 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 CKMP06732 381 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ALADP13716 330 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SYN1P17600 705 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TPH1P17752 444 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 PFKLP17858 780 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 HDCP19113 662 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 GP5P40197 560 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 CD86P42081 329 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 NEK3P51956 506 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 WDR4P57081 412 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ERVFC1P60507 584 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SLC7A9P82251 487 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SLC18A2Q05940 514 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 DNAJC3Q13217 504 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 BMPR2Q13873 1038 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 POU6F1Q14863 301 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 PCSK7Q16549 785 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 PCID2Q5JVF3 399 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 IL31Q6EBC2 164 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 PKN3Q6P5Z2 889 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 POTEHQ6S545 545 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ZNF783Q6ZMS7 281 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 Q6ZNB5 142 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TIFABQ6ZNK6 161 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 LRRC34Q8IZ02 419 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 UNC5BQ8IZJ1 945 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 POF1BQ8WVV4 589 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SERAC1Q96JX3 654 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TGS1Q96RS0 853 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SLC22A12Q96S37 553 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 KLF6Q99612 283 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 CPNE1Q99829 537 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SPON2Q9BUD6 331 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 KIFC1Q9BW19 673 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 CINPQ9BW66 212 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 LRRC3Q9BY71 257 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 POLR1EQ9GZS1 481 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 IQCGQ9H095 443 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ATP13A1Q9HD20 1204 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ALG13Q9NP73 1137 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ASAH2Q9NR71 780 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 MKS1Q9NXB0 559 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SLC17A6Q9P2U8 582 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SEPT3Q9UH03 358 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 SH3BP1Q9Y3L3 701 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TCAF1Q9Y4C2 921 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 NOTCH4Q99466 2003 aa9.27□□□□□ -0.92
SMARCC1-208ENST00000492896 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 COPEO14579 308 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 CCL16O15467 120 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 KDELR3O43731 214 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 TBL1XO60907 577 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 FGF19O95750 216 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 MMP2P08253 660 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 ERVK-10P10266 1014 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 PYGBP11216 843 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 MYL4P12829 197 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 PAMP19021 973 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 NMBRP28336 390 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 CSE1LP55060 971 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SEPT6Q14141 434 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 RFTN1Q14699 578 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SLC1A5Q15758 541 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SMAD1Q15797 465 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SLC14A2Q15849 920 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 PDK4Q16654 411 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 QPCTQ16769 361 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 GRTP1Q5TC63 336 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 MROH9Q5TGP6 573 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 GKAP1Q5VSY0 366 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 RNF219Q5W0B1 726 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 PDPK2PQ6A1A2 396 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 DENND5AQ6IQ26 1287 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 RANBP10Q6VN20 620 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 MICALCLQ6ZW33 695 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 GAREM2Q75VX8 874 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 RTL10Q7L3V2 364 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 KCNMB4Q86W47 210 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SPATS2Q86XZ4 545 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 FAM217AQ8IXS0 508 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 CACNA2D3Q8IZS8 1091 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 PGBD5Q8N414 524 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 MRPL43Q8N983 215 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 OR52K2Q8NGK3 314 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 ARRDC2Q8TBH0 407 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SPPL3Q8TCT6 385 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 TCP10LQ8TDR4 215 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 ACMSDQ8TDX5 336 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
SMARCC1-208ENST00000492896 SLC22A17Q8WUG5 538 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms