RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 FBXL22Q6P050 247 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 KIAA0907Q7Z7F0 614 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CHSY1Q86X52 802 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CIR1Q86X95 450 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ZNF513Q8N8E2 541 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 NSMCE1Q8WV22 266 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SORCS1Q8WY21 1168 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ERLEC1Q96DZ1 483 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 STAMBPL1Q96FJ0 436 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SLC2A11Q9BYW1 496 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 WDCPQ9H6R7 721 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 LRRC19Q9H756 370 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ABCB8Q9NUT2 735 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 FGFR1OP2Q9NVK5 253 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 C15orf41Q9Y2V0 281 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ARL2BPQ9Y2Y0 163 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 LILRB5O75023 590 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ACSL3O95573 720 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ANP32DO95626 131 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SLC2A3P11169 496 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ITIH2P19823 946 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CCND1P24385 295 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 MAN1A1P33908 653 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 OGDHQ02218 1023 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 BNIP1Q12981 228 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SRSF5Q13243 272 aaKnown RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 NAA25Q14CX7 972 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 LRRC14Q15048 493 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ADIPOR2Q86V24 386 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 FAM131BQ86XD5 332 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ZNF683Q8IZ20 524 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 HJURPQ8NCD3 748 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ZNF564Q8TBZ8 553 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 MGARPQ8TDB4 240 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CENPIQ92674 756 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SIK2Q9H0K1 926 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 IRF2BPLQ9H1B7 796 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 ZSCAN32Q9NX65 697 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 UVRAGQ9P2Y5 699 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 SLC8A2Q9UPR5 921 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 F9P00740 461 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 PTPN9P43378 593 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KCNJ2P63252 427 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 LMAN2Q12907 356 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CRY1Q16526 586 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ACCSLQ4AC99 568 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 BRMS1LQ5PSV4 323 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 UBAP2Q5T6F2 1119 aaKnown RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 DNAJC24Q6P3W2 148 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ARHGEF18Q6ZSZ5 1173 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 SPATA21Q7Z572 469 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CARNMT1Q8N4J0 409 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 FIBINQ8TAL6 211 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 AGAP11Q8TF27 550 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 MAIP1Q8WWC4 291 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 FAM122AQ96E09 287 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 MCEEQ96PE7 176 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 DDX50Q9BQ39 737 aaKnown RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 NUP85Q9BW27 656 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 TRIM7Q9C029 511 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 INTS6Q9UL03 887 aaKnown RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 VANGL2Q9ULK5 521 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CACNA1HO95180 2353 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CKAP5Q14008 2032 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 TCRBV7S2A1N4TA0A589 114 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 PROB1E7EW31 1015 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 F5H5T6 163 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 HRO43593 1189 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 LUC7L3O95232 432 aaKnown RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 TTC4O95801 387 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 GPD1P21695 349 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 HOXA6P31267 233 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 SDC4P31431 198 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KCNJ1P48048 391 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 NUMBP49757 651 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 HDAC4P56524 1084 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CAV1Q03135 178 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 MAMLD1Q13495 774 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 SIX1Q15475 284 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-219ENST00000491747 PLEKHA7Q6IQ23 1121 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KIAA1211LQ6NV74 962 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CHST9Q7L1S5 443 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ANKS1BQ7Z6G8 1248 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 MFN1Q8IWA4 741 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 OR52K2Q8NGK3 314 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CKAP2Q8WWK9 683 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ACDQ96AP0 544 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 GRAMD1AQ96CP6 724 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 SNF8Q96H20 258 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 VCPIP1Q96JH7 1222 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KCNK9Q9NPC2 374 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 ELOVL2Q9NXB9 296 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 CACNA2D2Q9NY47 1150 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 KLHL14Q9P2G3 628 aa9.6□□□□□ -0.87
BRCA1-219ENST00000491747 RAD54BQ9Y620 910 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms