RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CCDC81Q6ZN84 652 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 SLC35F3Q8IY50 421 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 RBFAQ8N0V3 343 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 ATP11CQ8NB49 1132 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 MED15Q96RN5 788 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 TRIM62Q9BVG3 475 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 BOCQ9BWV1 1114 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 TRIM4Q9C037 500 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 TMPRSS4Q9NRS4 437 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 PIGVQ9NUD9 493 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 ZNF212Q9UDV6 495 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 IL36AQ9UHA7 158 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 GGT7Q9UJ14 662 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 FADS3Q9Y5Q0 445 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 ACTL7AQ9Y615 435 aa13.51□□□□□ -0.25
USF1-206ENST00000491629 SDK2Q58EX2 2172 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 P4HA2O15460 535 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 ENDOD1O94919 500 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 PRNPP04156 253 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 KRT5P13647 590 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 ADRB3P13945 408 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 NFKB2Q00653 900 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 APBA1Q02410 837 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 SRSF1Q07955 248 aaKnown RBP eCLIP13.5□□□□□ -0.25
USF1-206ENST00000491629 NME3Q13232 169 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 GJB7Q6PEY0 223 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 OLFML1Q6UWY5 402 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 RBM44Q6ZP01 1051 aaKnown RBP13.5□□□□□ -0.25
USF1-206ENST00000491629 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 PARGQ86W56 976 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
USF1-206ENST00000491629 OR7D4Q8NG98 312 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 LMX1AQ8TE12 382 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 RNF34Q969K3 372 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 CEP63Q96MT8 703 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 GSDMAQ96QA5 445 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 PPP1R9BQ96SB3 815 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 C1QTNF2Q9BXJ5 285 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
USF1-206ENST00000491629 SIK2Q9H0K1 926 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 ASNSD1Q9NWL6 643 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 SALL4Q9UJQ4 1053 aa13.5□□□□□ -0.25
USF1-206ENST00000491629 ZFC3H1O60293 1989 aaKnown RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 NTN3O00634 580 aaPredicted RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 MUSKO15146 869 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 THAP12O43422 761 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 TNFSF15O95150 251 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 CD160O95971 181 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 HSP90AA1P07900 732 aaKnown RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 GLI1P08151 1106 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 JUNDP17535 347 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 ITGB6P18564 788 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 BMP6P22004 513 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 GNA15P30679 374 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 CSRP3P50461 194 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 PFN3P60673 137 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 KRT83P78385 493 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 NFATC3Q12968 1075 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 C1orf61Q13536 156 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 PDE1CQ14123 709 aaPredicted RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 ZSCAN23Q3MJ62 389 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 CCDC40Q4G0X9 1142 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 ISM2Q6H9L7 571 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 KIAA1161Q6NSJ0 714 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 PARS2Q7L3T8 475 aaKnown RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 PRICKLE2Q7Z3G6 844 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 B3GNT8Q7Z7M8 397 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 DCAF4L2Q8NA75 395 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 WDR36Q8NI36 951 aaKnown RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 FAM174AQ8TBP5 190 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 GRAMD1AQ96CP6 724 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 C2orf49Q9BVC5 232 aaPredicted RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 CLPBQ9H078 707 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 ARHGEF38Q9NXL2 777 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 MPP6Q9NZW5 540 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 IL17BQ9UHF5 180 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 RABGEF1Q9UJ41 708 aa13.49□□□□□ -0.25
USF1-206ENST00000491629 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
USF1-206ENST00000491629 IGLON5A6NGN9 336 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 TERTO14746 1132 aaKnown RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 TPP1O14773 563 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 HSF2BPO75031 334 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 TCEA3O75764 348 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 ERBB2P04626 1255 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 RHOCP08134 193 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 CELA2BP08218 269 aaPredicted RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 ITGB7P26010 798 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 L1CAMP32004 1257 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 ABL2P42684 1182 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 RABIFP47224 123 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 CXCR3P49682 368 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 NEK3P51956 506 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 RPS21P63220 83 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms