RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 GRIN3AQ8TCU5 1115 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ZNF419Q96HQ0 510 aaPredicted RBP16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 HSPA12BQ96MM6 686 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 HEPHQ9BQS7 1158 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ZDHHC6Q9H6R6 413 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 HECAQ9UBI9 543 aaPredicted RBP16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 IPO11Q9UI26 975 aaKnown RBP16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SPAG17Q6Q759 2223 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 VPS13AQ96RL7 3174 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 TNRC6BQ9UPQ9 1833 aaKnown RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MEI4A8MW99 385 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 KPNA3O00505 521 aaPredicted RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MFSD11O43934 449 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LEFTY1O75610 366 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 IGSF6O95976 241 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 DPP6P42658 865 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PAFAH1B3Q15102 231 aaKnown RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CYTH1Q15438 398 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ARSIQ5FYB1 569 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RYBPQ8N488 228 aaPredicted RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ATPAF2Q8N5M1 289 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 GPR161Q8N6U8 529 aaKnown RBP16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PIGKQ92643 395 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PARD6AQ9NPB6 346 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LHX3Q9UBR4 397 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PLK4O00444 970 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ARHGAP6O43182 974 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SLC7A4O43246 635 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ITPKAP23677 461 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RFTN1Q14699 578 aaPredicted RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CCDC6Q16204 474 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PLA2G2CQ5R387 149 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SYCP2LQ5T4T6 812 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ATXN7L2Q5T6C5 722 aaPredicted RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LRRC8AQ8IWT6 810 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PQLC3Q8N755 202 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 OR6K2Q8NGY2 324 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 FAM131CQ96AQ9 280 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ARRDC3Q96B67 414 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PPP1R16AQ96I34 528 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ZNF599Q96NL3 588 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RNF157Q96PX1 679 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CINPQ9BW66 212 aaPredicted RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 C6orf106Q9H6K1 298 aaPredicted RBP16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 VPS45Q9NRW7 570 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ABCA7Q8IZY2 2146 aa16.54■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 USP34Q70CQ2 3546 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CEP192Q8TEP8 1941 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LRRC72A6NJI9 287 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 METTL12A8MUP2 240 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 KRIT1O00522 736 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MAFKO60675 156 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PALMO75781 387 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 POP4O95707 220 aaKnown RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 TGM1P22735 817 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 GKP32189 559 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 HOXD12P35452 270 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ADPRHP54922 357 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RAD51Q06609 339 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 GALNT2Q10471 571 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CNTN1Q12860 1018 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 CSRP2Q16527 193 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 IFI16Q16666 785 aaKnown RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MYLK3Q32MK0 819 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 WDR45BQ5MNZ6 344 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 TMCO4Q5TGY1 634 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 AGBL4Q5VU57 503 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LRRC49Q8IUZ0 686 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SYT12Q8IV01 421 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 OR2T34Q8NGX1 318 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 OR14C36Q8NHC7 312 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RNF25Q96BH1 459 aaPredicted RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 LRIG1Q96JA1 1093 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 EXOC2Q96KP1 924 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 TRIM10Q9UDY6 481 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 PILRBQ9UKJ0 227 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 NUP205Q92621 2012 aa16.52■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 A0A0U1RQJ8 604 aa16.52■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 FAM47DPA6NHR8 397 aa16.52■□□□□ 0.24
MSH5-SAPCD1-206ENST00000491552 RNF103O00237 685 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms