RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 K7ERQ8 282 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 TTI1O43156 1089 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 SMAD6O43541 496 aaKnown RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 IGSF6O95976 241 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 GSRP00390 522 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 NRLP54845 237 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 TUBB4BP68371 445 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 MRPS21P82921 87 aaKnown RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 ZXDAP98168 799 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 NSUN2Q08J23 767 aaKnown RBP eCLIP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 ENPP2Q13822 863 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 LRRC32Q14392 662 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 DLG2Q15700 870 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 GLE1Q53GS7 698 aaKnown RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 RALGPS1Q5JS13 557 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 DGKKQ5KSL6 1271 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 EGFLAMQ63HQ2 1017 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 ARHGEF18Q6ZSZ5 1173 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 PLPP6Q8IY26 295 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 NOA1Q8NC60 698 aaKnown RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 TSEN2Q8NCE0 465 aaKnown RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 AGAP3Q96P47 875 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 NECAB3Q96P71 396 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 UHRF1Q96T88 793 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-230ENST00000491028 NELL2Q99435 816 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 GBA3Q9H227 469 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 TMEM245Q9H330 911 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 GLOD4Q9HC38 313 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 LTB4R2Q9NPC1 389 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 RSPH14Q9UHP6 348 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 SLCO3A1Q9UIG8 710 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 HCN2Q9UL51 889 aa18.92■□□□□ 0.62
MCF2L-230ENST00000491028 KANSL1LA0AUZ9 987 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 ZBTB24O43167 697 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 RAD51CO43502 376 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 CES1P23141 567 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 RPL22P35268 128 aaKnown RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 CSNK1DP48730 415 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 SNRPD1P62314 119 aaKnown RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 ACCSLQ4AC99 568 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 HSF5Q4G112 596 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 CCDC70Q6NSX1 233 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 SERPINA13PQ6UXR4 307 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 SIX5Q8N196 739 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 SYNPOQ8N3V7 929 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 PGBD5Q8N414 524 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 GLIS1Q8NBF1 620 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 OR2AP1Q8NGE2 309 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 FRS2Q8WU20 508 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 GDAP1L1Q96MZ0 367 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 NDRG2Q9UN36 371 aaKnown RBP18.91■□□□□ 0.62
MCF2L-230ENST00000491028 TTLL3Q9Y4R7 772 aa18.91■□□□□ 0.62
MCF2L-230ENST00000491028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 EDDM13A0A1B0GTR0 161 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 TTC34A8MYJ7 566 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 RIOK3O14730 519 aaKnown RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 MUSKO15146 869 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF821O75541 412 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 NFKB1P19838 968 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 CR2P20023 1033 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 CD72P21854 359 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 CD68P34810 354 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 TIE1P35590 1138 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 FDFT1P37268 417 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 IL12RB1P42701 662 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 MAPK8P45983 427 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 RECQLP46063 649 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 SEC13P55735 322 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 PARP6Q2NL67 630 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 HNRNPA1L2Q32P51 320 aaKnown RBP18.9■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF687Q8N1G0 1237 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 FCRL5Q96RD9 977 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 NUDCD1Q96RS6 583 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 RAB17Q9H0T7 212 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 SLC25A51Q9H1U9 297 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 SUN2Q9UH99 717 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 STON1Q9Y6Q2 735 aa18.9■□□□□ 0.62
MCF2L-230ENST00000491028 TARSL2A2RTX5 802 aaKnown RBP18.89■□□□□ 0.61
MCF2L-230ENST00000491028 EFCAB8A8MWE9 144 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 RNF40O75150 1001 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 ZSCAN5DPP0CG00 497 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 CHRNB1P11230 501 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 ETS1P14921 441 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 TARSP26639 723 aaKnown RBP18.89■□□□□ 0.61
MCF2L-230ENST00000491028 NTSR1P30989 418 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 RGRP47804 291 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 MAXP61244 160 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 AP1S1P61966 158 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 ITKQ08881 620 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 SIGLEC14Q08ET2 396 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 TRIP13Q15645 432 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-230ENST00000491028 SLC14A2Q15849 920 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 CARD16Q5EG05 197 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 EMC10Q5UCC4 262 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 SDE2Q6IQ49 451 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 Q6ZVU0 165 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 CHPFQ8IZ52 775 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 LRRN4CLQ8ND94 238 aa18.89■□□□□ 0.61
MCF2L-230ENST00000491028 LRRC45Q96CN5 670 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms