RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PCDHGC4Q9Y5F7 938 aa7.78□□□□□ -1.16
CLDN1-202ENST00000490800 KCNMB2Q9Y691 235 aa7.78□□□□□ -1.16
CLDN1-202ENST00000490800 NCOR2Q9Y618 2525 aa7.78□□□□□ -1.16
CLDN1-202ENST00000490800 hCG_1818297A0A087WSY0 165 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TCRBV21S2A2A0A5A6 115 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 LRRD1A4D1F6 860 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PATE3B3GLJ2 98 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PRRT4C9JH25 899 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 NEDD8-MDP1E9PL57 170 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CCDC188H7C350 402 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 M0QYT0 321 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CAPN9O14815 690 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 KLKB1P03952 638 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 HMBSP08397 361 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CD48P09326 243 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CISD3P0C7P0 127 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 NCAM1P13591 858 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TYRP14679 529 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 RDXP35241 583 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CDKN2BP42772 138 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 DHPSP49366 369 aaPredicted RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 YWHAGP61981 247 aaKnown RBP eCLIP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TUBB4BP68371 445 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ADCY2Q08462 1091 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 EFEMP1Q12805 493 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 KLF1Q13351 362 aaPredicted RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PPP2R5EQ16537 467 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CA9Q16790 459 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 HSF5Q4G112 596 aaPredicted RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PREPLQ4J6C6 727 aaPredicted RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 BOLA3Q53S33 107 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ZFYVE27Q5T4F4 411 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 RNF43Q68DV7 783 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 GRAMD4Q6IC98 578 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 KLHDC10Q6PID8 442 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TAC4Q86UU9 113 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 C11orf74Q86VG3 221 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 MIB1Q86YT6 1006 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CCDC50Q8IVM0 306 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ZNF276Q8N554 614 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CCDC185Q8N715 623 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PRELID2Q8N945 189 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TERB1Q8NA31 727 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 KCTD6Q8NC69 237 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 FAM71BQ8TC56 605 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 DQX1Q8TE96 717 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 HMGB4Q8WW32 186 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 HSPH1Q92598 858 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PIGKQ92643 395 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 BHMTQ93088 406 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ERLEC1Q96DZ1 483 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PGAP3Q96FM1 320 aaPredicted RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 XPO6Q96QU8 1125 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ACOX2Q99424 681 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 KRT12Q99456 494 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 SNRNP25Q9BV90 132 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 TRIM62Q9BVG3 475 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 BBS2Q9BXC9 721 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 HEMGNQ9BXL5 484 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 ABCC13Q9NSE7 274 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 PIGVQ9NUD9 493 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 DNAJC17Q9NVM6 304 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
CLDN1-202ENST00000490800 STARD13Q9Y3M8 1113 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 MYO16Q9Y6X6 1858 aa7.77□□□□□ -1.17
CLDN1-202ENST00000490800 MYOFQ9NZM1 2061 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 SYNJ2BP-COX16A0A087WUM0 186 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 GOLGA6L10A0A0M3HER8 536 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 C4orf47A7E2U8 309 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 WASH3PC4AMC7 463 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CACNG3O60359 315 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 PHF2O75151 1096 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 STC2O76061 302 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 IGLV3-25P01717 112 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 RHOXF2BP0C7M4 288 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 KRT10P13645 584 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 IL4RP24394 825 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 NTSR1P30989 418 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CETN2P41208 172 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 P2RY2P41231 377 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DGKGP49619 791 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CXCR3P49682 368 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CDH6P55285 790 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 IRX4P78413 519 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MRPS25P82663 173 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 COG7P83436 770 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DEUP1Q05D60 604 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 NME3Q13232 169 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 EIF4EBP2Q13542 120 aaPredicted RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DPYSL3Q14195 570 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 KRT81Q14533 505 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 PDK2Q15119 407 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CYP1B1Q16678 543 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 ZC3H12AQ5D1E8 599 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 TFDP3Q5H9I0 405 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms