RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ANKRD1	Q15327	319 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TAF7	Q15545	349 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TIGD6	Q17RP2	521 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	MMEL1	Q495T6	779 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	FBXO47	Q5MNV8	452 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	MEX3C	Q5U5Q3	659 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	SULT6B1	Q6IMI4	303 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	ALKBH5	Q6P6C2	394 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	SERPINA13P	Q6UXR4	307 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RANBP10	Q6VN20	620 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF813	Q6ZN06	617 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	B4GALNT4	Q76KP1	1039 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	GALNT7	Q86SF2	657 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC9B2	Q86UD5	537 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RFX6	Q8HWS3	928 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	UNC45B	Q8IWX7	931 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	OR8H3	Q8N146	312 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	FAM71D	Q8N9W8	422 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	GOT1L1	Q8NHS2	421 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TDRD7	Q8NHU6	1098 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	BICD2	Q8TD16	824 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	WIPF2	Q8TF74	440 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RFFL	Q8WZ73	363 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RUBCN	Q92622	972 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	KIF1BP	Q96EK5	621 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	WBP1	Q96G27	269 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RBM18	Q96H35	190 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	MAEL	Q96JY0	434 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	CCDC17	Q96LX7	622 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	C7orf26	Q96N11	449 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	PIGS	Q96S52	555 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	EYA3	Q99504	573 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM79	Q9BSE2	394 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	POLR3C	Q9BUI4	534 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	PRSS22	Q9GZN4	317 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TRPV4	Q9HBA0	871 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	PREB	Q9HCU5	417 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	CCDC177	Q9NQR7	707 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	TFCP2L1	Q9NZI6	479 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	KIF17	Q9P2E2	1029 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	ADD3	Q9UEY8	706 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	SRP68	Q9UHB9	627 aa	Known RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	SH3BGRL2	Q9UJC5	107 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	MOSPD1	Q9UJG1	213 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RPS6KA6	Q9UK32	745 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	VPS4A	Q9UN37	437 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	DUSP12	Q9UNI6	340 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	UBE2J1	Q9Y385	318 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	ATP6V0A2	Q9Y487	856 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	ANGPTL3	Q9Y5C1	460 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	PCDHGB5	Q9Y5G0	923 aa		2.71	□□□□□ -1.98
PUM3-204	ENST00000490444	RSF1	Q96T23	1441 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	IGKV2D-30	A0A075B6S6	120 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CYP2D7	A0A087X1C5	515 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444		H0Y626	953 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	UBE2Q2L	H0YL09	131 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	AP3D1	O14617	1153 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TSPAN3	O60637	253 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PPP6R2	O75170	966 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	GCAT	O75600	419 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	GOSR1	O95249	250 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PEPD	P12955	493 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	RPS2	P15880	293 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CHM	P24386	653 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CST5	P28325	142 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	AKT1	P31749	480 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	STAT6	P42226	847 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CD151	P48509	253 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	RCAN1	P53805	252 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CASP6	P55212	293 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	POLE2	P56282	527 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	AP2B1	P63010	937 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CFHR1	Q03591	330 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TLE2	Q04725	743 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	DMTN	Q08495	405 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	DMWD	Q09019	674 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SF3A3	Q12874	501 aa	Known RBP eCLIP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	WTAP	Q15007	396 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	DAZAP2	Q15038	168 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PPA1	Q15181	289 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TRIP6	Q15654	476 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	FAM110C	Q1W6H9	321 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM266	Q2M3C6	531 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	KRTCAP3	Q53RY4	240 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	RAB12	Q6IQ22	244 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	RPUSD3	Q6P087	351 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	MIS18BP1	Q6P0N0	1132 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	NFRKB	Q6P4R8	1299 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SHQ1	Q6PI26	577 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM65	Q6PI78	240 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	KDELC1	Q6UW63	502 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CCBE1	Q6UXH8	406 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444		Q6ZTC4	211 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	DZIP1	Q86YF9	867 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	C2CD5	Q86YS7	1000 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	RNF168	Q8IYW5	571 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TBC1D21	Q8IYX1	336 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF619	Q8N2I2	560 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	GALNT16	Q8N428	558 aa		2.7	□□□□□ -1.98

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