RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNX5-214ENST00000490175 TEX26Q8N6G2 289 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 SP110Q9HB58 689 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 ZNF212Q9UDV6 495 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 A0A096LPK6 155 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 SLC38A8A6NNN8 435 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 CSRP3P50461 194 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 WNT3AP56704 352 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 YBEYP58557 167 aaPredicted RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 POU6F1Q14863 301 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 RAP1GAP2Q684P5 730 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 IGSF8Q969P0 613 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 AZIN2Q96A70 460 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 SLC7A6OSQ96CW6 309 aaPredicted RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 RSRC1Q96IZ7 334 aaKnown RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 ZNF778Q96MU6 729 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 STN1Q9H668 368 aaKnown RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 EBF2Q9HAK2 575 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 PAK6Q9NQU5 681 aaPredicted RBP16.31■□□□□ 0.2
SNX5-214ENST00000490175 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
SNX5-214ENST00000490175 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 TLR5O60602 858 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 EFEMP2O95967 443 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 APOA4P06727 396 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 CPA3P15088 417 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 PTPN4P29074 926 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 SLC1A6P48664 564 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 IL10RBQ08334 325 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 KIAA0930Q6ICG6 404 aaPredicted RBP16.3■□□□□ 0.2
SNX5-214ENST00000490175 TLDC1Q6P9B6 456 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
SNX5-214ENST00000490175 WDR75Q8IWA0 830 aaKnown RBP16.3■□□□□ 0.2
SNX5-214ENST00000490175 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.24e-61■□□□□ 8.5
SNX5-214ENST00000490175 FBXO22Q8NEZ5 403 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
SNX5-214ENST00000490175 OVCA2Q8WZ82 227 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 ATXN7L3BQ96GX2 97 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
SNX5-214ENST00000490175 RANBP9Q96S59 729 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 FAM96AQ9H5X1 160 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 TREX1Q9NSU2 369 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 MTRRQ9UBK8 725 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 BACE2Q9Y5Z0 518 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 NUMBLQ9Y6R0 609 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
SNX5-214ENST00000490175 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 RAMP2O60895 175 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 CBX6O95503 412 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 C2P06681 752 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 KCNA4P22459 653 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 CCND1P24385 295 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 ARCN1P48444 511 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 TUFMP49411 452 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 VEGFBP49765 207 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 POLD3Q15054 466 aaPredicted RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 ZCCHC23Q6ZST2 131 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 TAS1R1Q7RTX1 841 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 C10orf107Q8IVU9 208 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 PIWIL2Q8TC59 973 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 PPP4R1Q8TF05 950 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 C20orf27Q9GZN8 174 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 HIPK3Q9H422 1215 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 SCN5AQ14524 2016 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 MIA3Q5JRA6 1907 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 HEATR9A2RTY3 570 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 J3KR12 359 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 COL6A2P12110 1019 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 ATF6P18850 670 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 ALDH7A1P49419 539 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 SLC10A7Q0GE19 358 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 SERINC3Q13530 473 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 C5orf22Q49AR2 442 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 PRSS55Q6UWB4 352 aaPredicted RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 OR6Y1Q8NGX8 325 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 NSL1Q96IY1 281 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 FAM167BQ9BTA0 163 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 CCSER2Q9H7U1 834 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 TLE6Q9H808 572 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 NOP53Q9NZM5 478 aaKnown RBP16.29■□□□□ 0.2
SNX5-214ENST00000490175 DNMT3LQ9UJW3 386 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 TLK1Q9UKI8 766 aa16.29■□□□□ 0.2
SNX5-214ENST00000490175 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms