RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 HEPHQ9BQS7 1158 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 CNPY3Q9BT09 278 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 HDAC8Q9BY41 377 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 TM6SF2Q9BZW4 377 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 MAGEH1Q9H213 219 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 ZMIZ1Q9ULJ6 1067 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 CA5BQ9Y2D0 317 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 TRPM6Q9BX84 2022 aa23.45■■□□□ 1.34
COL9A3-213ENST00000489045 WDFY3Q8IZQ1 3526 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 A0A1W2PQU0 124 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 PRAMEF26H0Y7S4 382 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 YKT6O15498 198 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 RAMP2O60895 175 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 L1CAMP32004 1257 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 STAT4Q14765 748 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 NEK5Q6P3R8 708 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 DCUN1D2Q6PH85 259 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 IQCHQ86VS3 1027 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 SPATS2Q86XZ4 545 aaKnown RBP23.44■■□□□ 1.34
COL9A3-213ENST00000489045 SAP25Q8TEE9 199 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 KLK6Q92876 244 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 MYOCQ99972 504 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 ZDHHC6Q9H6R6 413 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 HPCAL4Q9UM19 191 aa23.44■■□□□ 1.34
COL9A3-213ENST00000489045 CXorf51AA0A1B0GTR3 108 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 TMCO5BA8MYB1 307 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 SLC31A1O15431 190 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 TNFSF14O43557 240 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 DKK1O94907 266 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 PRLRP16471 622 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 EPHA8P29322 1005 aaPredicted RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 ARRB1P49407 418 aaPredicted RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 NEK3P51956 506 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 GEMIN4P57678 1058 aaKnown RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 POLD3Q15054 466 aaPredicted RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 ASIC2Q16515 512 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 ZNF284Q2VY69 593 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 LEKR1Q6ZMV7 388 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 HORMAD1Q86X24 394 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 OXR1Q8N573 874 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 ISG20Q96AZ6 181 aaKnown RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 NAP1L5Q96NT1 182 aaPredicted RBP23.43■■□□□ 1.34
COL9A3-213ENST00000489045 FUCA2Q9BTY2 467 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 ERVMER34-1Q9H9K5 563 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 FTSJ1Q9UET6 329 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 FZD10Q9ULW2 581 aa23.43■■□□□ 1.34
COL9A3-213ENST00000489045 A0A1B0GTH6 734 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 A0A1W2PQC6 194 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 PCDH8O95206 1070 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 ITGAVP06756 1048 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 ITGB7P26010 798 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 EPHB2P29323 1055 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 OGDHQ02218 1023 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 OVGP1Q12889 678 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 PPP1R2P3Q6NXS1 205 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 RTL3Q8N8U3 475 aaKnown RBP23.42■■□□□ 1.34
COL9A3-213ENST00000489045 TMEM145Q8NBT3 493 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 OR6K2Q8NGY2 324 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 ZCCHC14Q8WYQ9 949 aaKnown RBP23.42■■□□□ 1.34
COL9A3-213ENST00000489045 NOL6Q9H6R4 1146 aaKnown RBP23.42■■□□□ 1.34
COL9A3-213ENST00000489045 FZD3Q9NPG1 666 aa23.42■■□□□ 1.34
COL9A3-213ENST00000489045 HECAQ9UBI9 543 aaPredicted RBP23.42■■□□□ 1.34
COL9A3-213ENST00000489045 ZFR2Q9UPR6 939 aaKnown RBP23.42■■□□□ 1.34
COL9A3-213ENST00000489045 ATMINO43313 823 aaPredicted RBP23.41■■□□□ 1.34
COL9A3-213ENST00000489045 CREB3O43889 395 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 MAGEC1O60732 1142 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 ADRB3P13945 408 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 GKP32189 559 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 AIF1P55008 147 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 IQCB1Q15051 598 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 E4F1Q66K89 784 aaPredicted RBP23.41■■□□□ 1.34
COL9A3-213ENST00000489045 SEL1L3Q68CR1 1132 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 PARS2Q7L3T8 475 aaKnown RBP23.41■■□□□ 1.34
COL9A3-213ENST00000489045 TMC6Q7Z403 805 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 ZNF354CQ86Y25 554 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 PLPP6Q8IY26 295 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 RYBPQ8N488 228 aaPredicted RBP23.41■■□□□ 1.34
COL9A3-213ENST00000489045 VCPIP1Q96JH7 1222 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 EPAS1Q99814 870 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 HAUS4Q9H6D7 363 aa23.41■■□□□ 1.34
COL9A3-213ENST00000489045 ZZEF1O43149 2961 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 KDELR3O43731 214 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 GSRP00390 522 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 DESP17661 470 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 RXRGP48443 463 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 BNIP3Q12983 259 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 MAMLD1Q13495 774 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 TMEM259Q4ZIN3 620 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 CCDC157Q569K6 752 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 SFMBT2Q5VUG0 894 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 FBXL19Q6PCT2 694 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 DNAAF5Q86Y56 855 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 OR2AP1Q8NGE2 309 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 KLHDC7BQ96G42 594 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 PARVAQ9NVD7 372 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 AIPL1Q9NZN9 384 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 CHD6Q8TD26 2715 aa23.4■■□□□ 1.34
COL9A3-213ENST00000489045 TDRD6O60522 2096 aaKnown RBP23.4■■□□□ 1.34
COL9A3-213ENST00000489045 ARID1BQ8NFD5 2236 aaPredicted RBP23.4■■□□□ 1.34
COL9A3-213ENST00000489045 BUB1O43683 1085 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms