RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CCT6BQ92526 530 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 ATOH1Q92858 354 aaPredicted RBP3.92□□□□□ -1.78
RFC4-213ENST00000489028 ZNF333Q96JL9 665 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 CLSTN3Q9BQT9 956 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 NTPCRQ9BSD7 190 aaKnown RBP3.92□□□□□ -1.78
RFC4-213ENST00000489028 RASSF1Q9NS23 344 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 HIF1ANQ9NWT6 349 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 DHDHQ9UQ10 334 aa3.92□□□□□ -1.78
RFC4-213ENST00000489028 MORC2Q9Y6X9 1032 aaPredicted RBP3.92□□□□□ -1.78
RFC4-213ENST00000489028 SAC3D1A6NKF1 404 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 SOX30O94993 753 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 CNPP09543 421 aaKnown RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 HOXC6P09630 235 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 ITGB8P26012 769 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 RFC1P35251 1148 aaPredicted RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 PDLIM4P50479 330 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 EGR4Q05215 589 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 SHBQ15464 509 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 ADCK5Q3MIX3 580 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 CTXN3Q4LDR2 81 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 DENND1BQ6P3S1 775 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 LDHAL6AQ6ZMR3 332 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 RBM23Q86U06 439 aaKnown RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 C2CD5Q86YS7 1000 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 GPT2Q8TD30 523 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 ELP5Q8TE02 316 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 SLC35F5Q8WV83 523 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 NCSTNQ92542 709 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 TMEM18Q96B42 140 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 PHF21BQ96EK2 531 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 COG8Q96MW5 612 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 MSTO1Q9BUK6 570 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 LMAN2LQ9H0V9 348 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 WDR6Q9NNW5 1121 aaKnown RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 ATP8A2Q9NTI2 1148 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 GPR52Q9Y2T5 361 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 RRP7AQ9Y3A4 280 aaKnown RBP3.91□□□□□ -1.78
RFC4-213ENST00000489028 CLDN16Q9Y5I7 305 aa3.91□□□□□ -1.78
RFC4-213ENST00000489028 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FAM157AC9JC47 383 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 ADAP00813 363 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 ENO3P13929 434 aaPredicted RBP3.9□□□□□ -1.79
RFC4-213ENST00000489028 YWHAQP27348 245 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 DCTDP32321 178 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 HALP42357 657 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 ARL4CP56559 192 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 SLC18A2Q05940 514 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 MYBPC2Q14324 1141 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FSCBQ5H9T9 825 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 ZNF324BQ6AW86 544 aaPredicted RBP3.9□□□□□ -1.79
RFC4-213ENST00000489028 FAM83HQ6ZRV2 1179 aaPredicted RBP3.9□□□□□ -1.79
RFC4-213ENST00000489028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.9□□□□□ -1.79
RFC4-213ENST00000489028 ANKRD44Q8N8A2 993 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 TEX45Q8NA69 505 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 SPATA5Q8NB90 893 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 TMEM163Q8TC26 289 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 TWNKQ96RR1 684 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 NPFFR1Q9GZQ6 430 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 STN1Q9H668 368 aaKnown RBP3.9□□□□□ -1.79
RFC4-213ENST00000489028 MVB12BQ9H7P6 319 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 FBXO40Q9UH90 709 aa3.9□□□□□ -1.79
RFC4-213ENST00000489028 VWA3AA6NCI4 1184 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 VWA5AO00534 786 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 IRAK2O43187 625 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 KLK10O43240 276 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 HBP1O60381 514 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 SERPINC1P01008 464 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 TNNT1P13805 278 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 DSCR9P59020 149 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 TRAF3Q13114 568 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 SLC18A3Q16572 532 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 FBXO47Q5MNV8 452 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 ADHFE1Q8IWW8 467 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 RBFAQ8N0V3 343 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 MIGA1Q8NAN2 632 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 RASSF8Q8NHQ8 419 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 NUDCD2Q8WVJ2 157 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 MED30Q96HR3 178 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.89□□□□□ -1.79
RFC4-213ENST00000489028 NPLQ9BXD5 320 aaPredicted RBP3.89□□□□□ -1.79
RFC4-213ENST00000489028 SLCO5A1Q9H2Y9 848 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 TTC12Q9H892 705 aaPredicted RBP3.89□□□□□ -1.79
RFC4-213ENST00000489028 PPCSQ9HAB8 311 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 PROCRQ9UNN8 238 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 GDAQ9Y2T3 454 aa3.89□□□□□ -1.79
RFC4-213ENST00000489028 IFRD1O00458 451 aaPredicted RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 PEX12O00623 359 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 SLC25A17O43808 307 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 IL1AP01583 271 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 MMP3P08254 477 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 CKMT1AP12532 417 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 ZNF12P17014 697 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 CTPS1P17812 591 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms