RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 OSBPL1AQ9BXW6 950 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 NEUROG2Q9H2A3 272 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 NOL6Q9H6R4 1146 aaKnown RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 ZDHHC6Q9H6R6 413 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3DA0A087WVF3 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3IA0A087WXS9 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3KA0A087X1G2 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3FA6NER0 549 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3LB9A6J9 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 KRIT1O00522 736 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 NRDCO43847 1150 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 LEFTY1O75610 366 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 SYPP08247 313 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 SERPINF2P08697 491 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3HP0C7X1 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TCF4P15884 667 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 NAP1L1P55209 391 aaKnown RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 IL10RBQ08334 325 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 GRM3Q14832 879 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TEAD4Q15561 434 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 KIAA0895LQ68EN5 471 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3GQ6DHY5 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3CQ6IPX1 549 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 FBXL19Q6PCT2 694 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TBC1D3Q8IZP1 549 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 ATPAF2Q8N5M1 289 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 EDEM2Q9BV94 578 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 MAK16Q9BXY0 300 aaKnown RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 SLC39A8Q9C0K1 460 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
PHF1-210ENST00000488767 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
PHF1-210ENST00000488767 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
PHF1-210ENST00000488767 A0A0A6YYK5 440 aaPredicted RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 BCAT2O15382 392 aaPredicted RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 PALMO75781 387 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 AMPD1P23109 780 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ITGB7P26010 798 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 CD27P26842 260 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 NUDT1P36639 197 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 MAPK8P45983 427 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 RENBPP51606 427 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 NEK3P51956 506 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ADPRHP54922 357 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ZNF235Q14590 738 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 MYLK3Q32MK0 819 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 LRRC38Q5VT99 294 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ERN2Q76MJ5 926 aaKnown RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 ADAT2Q7Z6V5 191 aaKnown RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ZNF599Q96NL3 588 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 HDAC8Q9BY41 377 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 SMOC1Q9H4F8 434 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 SERGEFQ9UGK8 458 aa13.1□□□□□ -0.31
PHF1-210ENST00000488767 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
PHF1-210ENST00000488767 NEMP1O14524 444 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 PLRG1O43660 514 aaKnown RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 NEBLO76041 1014 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 CD160O95971 181 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 KRT1P04264 644 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms