RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 STEAP4Q687X5 459 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 SCAIQ8N9R8 606 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 TERB1Q8NA31 727 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 FAM47BQ8NA70 645 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 TBC1D15Q8TC07 691 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 GTF3C2Q8WUA4 911 aaPredicted RBP14.42□□□□□ -0.1
RER1-207ENST00000488353 NT5C1AQ9BXI3 368 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 EIF2AQ9BY44 585 aaKnown RBP14.42□□□□□ -0.1
RER1-207ENST00000488353 ILKAPQ9H0C8 392 aaPredicted RBP14.42□□□□□ -0.1
RER1-207ENST00000488353 TRPV6Q9H1D0 765 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 DHX35Q9H5Z1 703 aaKnown RBP14.42□□□□□ -0.1
RER1-207ENST00000488353 PRDM16Q9HAZ2 1276 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 IPO11Q9UI26 975 aaKnown RBP14.42□□□□□ -0.1
RER1-207ENST00000488353 GNPTGQ9UJJ9 305 aa14.42□□□□□ -0.1
RER1-207ENST00000488353 TRIM38O00635 465 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 HTRA2O43464 458 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 CSPG5O95196 566 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 ATE1O95260 518 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 TCN1P20061 433 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 TGM2P21980 687 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 CYP2F1P24903 491 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 ATICP31939 592 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 MOGQ16653 247 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 DCAF6Q58WW2 860 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 LYSMD3Q7Z3D4 306 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 TTC30AQ86WT1 665 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 ZSCAN18Q8TBC5 510 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 CLEC4CQ8WTT0 213 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 LRTOMTQ8WZ04 291 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 PGBD4Q96DM1 585 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 SLC29A1Q99808 456 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 NFKBIZQ9BYH8 718 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 WDR55Q9H6Y2 383 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 CXorf21Q9HAI6 301 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 KIAA1522Q9P206 1035 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 MFHAS1Q9Y4C4 1052 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 CCDC162PA2VCL2 907 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 HDAC3O15379 428 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 UGT1A6P19224 532 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 UGT1A1P22309 533 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 UGT1A4P22310 534 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 UGT1A3P35503 534 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 UGT1A5P35504 534 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 RHDQ02161 417 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 NAB1Q13506 487 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 TRIM25Q14258 630 aaKnown RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 PTK2BQ14289 1009 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 GRIK4Q16099 956 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 KIZQ2M2Z5 673 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 MAP7D1Q3KQU3 841 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 PRAMEF19Q5SWL8 479 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 MARCH8Q5T0T0 291 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 SLC9A4Q6AI14 798 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 OGFOD2Q6N063 350 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 CASC4Q6P4E1 433 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 OLFML1Q6UWY5 402 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 NAPRTQ6XQN6 538 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 NPLOC4Q8TAT6 608 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.12e-7■□□□□ 9.6
RER1-207ENST00000488353 DOK1Q99704 481 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 MRPL45Q9BRJ2 306 aaKnown RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 RPF2Q9H7B2 306 aaKnown RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 SETD4Q9NVD3 440 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 TRNAU1APQ9NX07 287 aaKnown RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 GPC6Q9Y625 555 aaPredicted RBP14.41□□□□□ -0.1
RER1-207ENST00000488353 SCN4AP35499 1836 aa14.41□□□□□ -0.1
RER1-207ENST00000488353 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 H3BMQ9 156 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 HCRTO43612 131 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 H2AFYO75367 372 aaKnown RBP14.4□□□□□ -0.1
RER1-207ENST00000488353 VAPBO95292 243 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 MMP3P08254 477 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 SLC6A3Q01959 620 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 KCNC4Q03721 635 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 NHSL2Q5HYW2 709 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 TNS4Q8IZW8 715 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 CNTD1Q8N815 330 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 TNIP2Q8NFZ5 429 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 AGR3Q8TD06 166 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 TOP1MTQ969P6 601 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 COG8Q96MW5 612 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 FAM49AQ9H0Q0 323 aaPredicted RBP14.4□□□□□ -0.1
RER1-207ENST00000488353 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 MORF4L1Q9UBU8 362 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 SNX13Q9Y5W8 968 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 NEMP1O14524 444 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 PPEF2O14830 753 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 PAPSS1O43252 624 aaPredicted RBP14.4□□□□□ -0.1
RER1-207ENST00000488353 TRIM13O60858 407 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 GABBR2O75899 941 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
RER1-207ENST00000488353 AMHP03971 560 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 GSTT2P0CG29 244 aa14.4□□□□□ -0.1
RER1-207ENST00000488353 GSTT2BP0CG30 244 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms