RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 SKA1Q96BD8 255 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 CRELD1Q96HD1 420 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 BMFQ96LC9 184 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 HDAC8Q9BY41 377 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 NOL6Q9H6R4 1146 aaKnown RBP11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 PPARGC1AQ9UBK2 798 aaKnown RBP11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 OR12D3Q9UGF7 316 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 LIMA1Q9UHB6 759 aaKnown RBP11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 DNAI1Q9UI46 699 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 GGT7Q9UJ14 662 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 PAXBP1Q9Y5B6 917 aa11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
PCYT1A-215ENST00000488235 POM121BA6NF01 834 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 PRNPP04156 253 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 THEGLP0DJG4 465 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 MYF5P13349 255 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ATP1A3P13637 1013 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 SDC4P31431 198 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ABL2P42684 1182 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 PTPN9P43378 593 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ARRB1P49407 418 aaPredicted RBP11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 DNA2P51530 1060 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 NRG1Q02297 640 aaPredicted RBP11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 INAVAQ3KP66 663 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ZNF542PQ5EBM4 170 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 TPRG1LQ5T0D9 272 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 WDR59Q6PJI9 974 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ZNF783Q6ZMS7 281 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 MON1BQ7L1V2 547 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 IQCHQ86VS3 1027 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 DNAAF5Q86Y56 855 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 MSANTD4Q8NCY6 345 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 BAP1Q92560 729 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 TMEM248Q9NWD8 314 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 TAS2R14Q9NYV8 317 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 TPX2Q9ULW0 747 aaKnown RBP11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 ITM2BQ9Y287 266 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 FADS3Q9Y5Q0 445 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 CFAP46Q8IYW2 2715 aa11.44□□□□□ -0.58
PCYT1A-215ENST00000488235 CHD5Q8TDI0 1954 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 YKT6O15498 198 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 CCP110O43303 1012 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 SIGLEC6O43699 453 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 RFPL3O75679 317 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PCDH8O95206 1070 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PLEKP08567 350 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 KRT3P12035 628 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ADRB3P13945 408 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 RHOQP17081 205 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ITIH2P19823 946 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 HNRNPA2B1P22626 353 aaKnown RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 L1CAMP32004 1257 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 NUDT1P36639 197 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 STAT1P42224 750 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 GSCP56915 257 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 RPL7AP62424 266 aaKnown RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 OGDHQ02218 1023 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 OVGP1Q12889 678 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 TARDBPQ13148 414 aaKnown RBP eCLIP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 SLC45A4Q5BKX6 768 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 LRRC73Q5JTD7 316 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PPP1R15BQ5SWA1 713 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 FKBP15Q5T1M5 1219 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ATXN7L2Q5T6C5 722 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 RETSATQ6NUM9 610 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 NEK5Q6P3R8 708 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 FBXL19Q6PCT2 694 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 STRADAQ7RTN6 431 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ABI3BPQ7Z7G0 1075 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PHF13Q86YI8 300 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 GALNT15Q8N3T1 639 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PCDH20Q8N6Y1 951 aaKnown RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 HNRNPLLQ8WVV9 542 aaKnown RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 KLHDC7BQ96G42 594 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 CCDC114Q96M63 670 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 HEPHQ9BQS7 1158 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 CALN1Q9BXU9 219 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ZDHHC6Q9H6R6 413 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ADAM22Q9P0K1 906 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 HECAQ9UBI9 543 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 PCDHGA1Q9Y5H4 931 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ASXL3Q9C0F0 2248 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 ADAMTS20P59510 1910 aa11.43□□□□□ -0.58
PCYT1A-215ENST00000488235 LRRC10BA6NIK2 292 aa11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 TEX33O43247 280 aa11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 NEBLO76041 1014 aa11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 PAK4O96013 591 aaPredicted RBP11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 GPD1P21695 349 aa11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 DGKAP23743 735 aa11.42□□□□□ -0.58
PCYT1A-215ENST00000488235 ITGB7P26010 798 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms