RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PTGR2Q8N8N7 351 aaPredicted RBP4.21□□□□□ -1.74
CCDC66-221ENST00000487739 SCAIQ8N9R8 606 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
CCDC66-221ENST00000487739 C3orf49Q96BT1 292 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 ADGRG7Q96K78 797 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 CLPBQ9H078 707 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 PABPC3Q9H361 631 aaKnown RBP4.21□□□□□ -1.74
CCDC66-221ENST00000487739 ACAD9Q9H845 621 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 TCF7L2Q9NQB0 619 aa4.21□□□□□ -1.74
CCDC66-221ENST00000487739 KDM4EB2RXH2 506 aaPredicted RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 SOCS5O75159 536 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 TFRCP02786 760 aaKnown RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 UMODP07911 640 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 F7P08709 466 aaPredicted RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 TCEA1P23193 301 aaKnown RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 YWHAQP27348 245 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 DPP6P42658 865 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 MXI1P50539 228 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 MYBPC2Q14324 1141 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 PFKFB4Q16877 469 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 CCDC117Q8IWD4 279 aaPredicted RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 BRSK2Q8IWQ3 736 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 RBFAQ8N0V3 343 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 MUC20Q8N307 709 aaPredicted RBP4.2□□□□□ -1.74
CCDC66-221ENST00000487739 SCAMP5Q8TAC9 235 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 DOCK7Q96N67 2140 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 ABHD16BQ9H3Z7 469 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 ARNT2Q9HBZ2 717 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 SLC45A1Q9Y2W3 748 aa4.2□□□□□ -1.74
CCDC66-221ENST00000487739 A0A087WV62 115 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 A0A096LPK6 155 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 STRNO43815 780 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 CYP21A2P08686 494 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 CKMT1AP12532 417 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 CHN1P15882 459 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 GPR12P47775 334 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 SNTA1Q13424 505 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 CTTNQ14247 550 aaKnown RBP4.19□□□□□ -1.74
CCDC66-221ENST00000487739 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 TBC1D9BQ66K14 1250 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 TYW3Q6IPR3 259 aaKnown RBP4.19□□□□□ -1.74
CCDC66-221ENST00000487739 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 RETSATQ6NUM9 610 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 SYNE3Q6ZMZ3 975 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 PKP4Q99569 1192 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 ELAC2Q9BQ52 826 aaKnown RBP4.19□□□□□ -1.74
CCDC66-221ENST00000487739 LRCH1Q9Y2L9 728 aa4.19□□□□□ -1.74
CCDC66-221ENST00000487739 IGLV5-37A0A075B6J1 123 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 A0A0U1RQJ8 604 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 A0A1B0GVM2 712 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 IGLV2-11P01706 119 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 AVPR2P30518 371 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 PEX5P50542 639 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 PNLIPRP1P54315 467 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 HILS1P60008 231 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 SF3B4Q15427 424 aaKnown RBP eCLIP4.18□□□□□ -1.74
CCDC66-221ENST00000487739 HSP90AB2PQ58FF8 381 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 RUNDC3AQ59EK9 446 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 XRRA1Q6P2D8 792 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 DSTYKQ6XUX3 929 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 GALNT15Q8N3T1 639 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 FSIP1Q8NA03 581 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 NODALQ96S42 347 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 NPFFR1Q9GZQ6 430 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 GRHL1Q9NZI5 618 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 FBXO40Q9UH90 709 aa4.18□□□□□ -1.74
CCDC66-221ENST00000487739 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 DYTNA2CJ06 578 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 PRC1O43663 620 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 ACP5P13686 325 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 PDIA3P30101 505 aaKnown RBP4.17□□□□□ -1.74
CCDC66-221ENST00000487739 DCTDP32321 178 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 SERPINF1P36955 418 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 ADORA2A-AS1P86434 159 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 TNFAIP2Q03169 654 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 MYBPHQ13203 477 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 PDCLQ13371 301 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 LRRC24Q50LG9 513 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 LIN54Q6MZP7 749 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 NEK10Q6ZWH5 1172 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 TBC1D22AQ8WUA7 517 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 IL17FQ96PD4 163 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 TRAPPC9Q96Q05 1148 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 GAREM1Q9H706 876 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 THAP1Q9NVV9 213 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 DONSONQ9NYP3 566 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 MALT1Q9UDY8 824 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 KCND3Q9UK17 655 aa4.17□□□□□ -1.74
CCDC66-221ENST00000487739 TARSL2A2RTX5 802 aaKnown RBP4.16□□□□□ -1.74
CCDC66-221ENST00000487739 FAM90A20PA6NIJ5 464 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 BMPR1BO00238 502 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 CHL1O00533 1208 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 SEPT4O43236 478 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 CBX6O95503 412 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 ARSAP15289 507 aa4.16□□□□□ -1.74
CCDC66-221ENST00000487739 RPL3P39023 403 aaKnown RBP4.16□□□□□ -1.74
CCDC66-221ENST00000487739 PNPLA4P41247 253 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms