RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MUC3BQ9H195 1237 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 ASNSD1Q9NWL6 643 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 IL36AQ9UHA7 158 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 SALL4Q9UJQ4 1053 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 BECN2A8MW95 431 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 NOBOXO60393 691 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 ZMPSTE24O75844 475 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 LETM1O95202 739 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 ADCY5O95622 1261 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PAK4O96013 591 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 GLI1P08151 1106 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 KRT5P13647 590 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 ITGB7P26010 798 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 CSRP3P50461 194 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 CLCN6P51797 869 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 NEK3P51956 506 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PFN3P60673 137 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PDE1CQ14123 709 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 OLFML1Q6UWY5 402 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 FAM183BPQ6ZVS7 135 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PARS2Q7L3T8 475 aaKnown RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PRICKLE2Q7Z3G6 844 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 WDR36Q8NI36 951 aaKnown RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 CEP63Q96MT8 703 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 GSDMAQ96QA5 445 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PPP1R9BQ96SB3 815 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 C2orf49Q9BVC5 232 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 C1QTNF2Q9BXJ5 285 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 INTS2Q9H0H0 1204 aaKnown RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 GDPD2Q9HCC8 539 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 PIGVQ9NUD9 493 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 ARHGEF38Q9NXL2 777 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 GGT7Q9UJ14 662 aa15.67■□□□□ 0.1
MCF2L-228ENST00000487354 ATXN7L1Q9ULK2 861 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-228ENST00000487354 NTN3O00634 580 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 TPP1O14773 563 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 MUSKO15146 869 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 AP1G1O43747 822 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 HSF2BPO75031 334 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 DAB1O75553 588 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 TNFSF15O95150 251 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ERBB2P04626 1255 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 RHOCP08134 193 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ITGA2BP08514 1039 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 JUNDP17535 347 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ITGB6P18564 788 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 GNA15P30679 374 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 MLLT3P42568 568 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ABL2P42684 1182 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 RABIFP47224 123 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 RPS21P63220 83 aaKnown RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 NFATC3Q12968 1075 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 NME3Q13232 169 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 NR0B2Q15466 257 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 B3GNT8Q7Z7M8 397 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 TRIM59Q8IWR1 403 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 OR7D4Q8NG98 312 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 LMX1AQ8TE12 382 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 RNF34Q969K3 372 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC97Q96F63 343 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 LENG8Q96PV6 779 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-228ENST00000487354 LRRC61Q9BV99 259 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 DYRK4Q9NR20 520 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 TMPRSS4Q9NRS4 437 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 EVA1BQ9NVM1 165 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 NCKIPSDQ9NZQ3 722 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ACTL7AQ9Y615 435 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 ANKRD36A6QL64 1941 aa15.66■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC187A0A096LP49 1063 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 DRGXA6NNA5 263 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 H3BM21 787 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 THAP12O43422 761 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 ENDOD1O94919 500 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CD160O95971 181 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 L1CAMP32004 1257 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 KRT83P78385 493 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 ARF5P84085 180 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 NFKB2Q00653 900 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC15Q0P6D6 951 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 ZSCAN23Q3MJ62 389 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC40Q4G0X9 1142 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 C6orf132Q5T0Z8 1188 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 GJB7Q6PEY0 223 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 FOXR1Q6PIV2 292 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 SETD3Q86TU7 594 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-228ENST00000487354 TPCN2Q8NHX9 752 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 LIN37Q96GY3 246 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CCNL2Q96S94 520 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC3Q9BQI4 270 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 CLPBQ9H078 707 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 SIK2Q9H0K1 926 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 STARD5Q9NSY2 213 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 MPP6Q9NZW5 540 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 IL17BQ9UHF5 180 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms