RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SMPD3Q9NY59 655 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 GABBR1Q9UBS5 961 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PSAT1Q9Y617 370 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 HMX2A2RU54 273 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ANKRD34BA5PLL1 514 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ACOT8O14734 319 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ANGPT2O15123 496 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 INPP4BO15327 924 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 NADKO95544 446 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 METTL18O95568 372 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 APBA3O96018 575 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MT-CO1P00395 513 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 AVPR1AP37288 418 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 DPP6P42658 865 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CCR10P46092 362 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 HK2P52789 917 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 COPZ1P61923 177 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 USP10Q14694 798 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PAGE2BQ5JRK9 111 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 LIPMQ5VYY2 423 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SLC22A16Q86VW1 577 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 C4orf19Q8IY42 314 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 RAVER1Q8IY67 606 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CLIP4Q8N3C7 705 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ANKFN1Q8N957 763 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ABHD11Q8NFV4 315 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 RXFP2Q8WXD0 754 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CERS2Q96G23 380 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CTRCQ99895 268 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ARPC5LQ9BPX5 153 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CNPY3Q9BT09 278 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SLC25A23Q9BV35 468 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MROQ9BYG7 248 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MTMR12Q9C0I1 747 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 RNF38Q9H0F5 515 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CD320Q9NPF0 282 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 GDAP2Q9NXN4 497 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 HACD3Q9P035 362 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TJP2Q9UDY2 1190 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 EGFL7Q9UHF1 273 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 BAG5Q9UL15 447 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 GOLGA8CPA6NN73 597 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TBKBP1A7MCY6 615 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 NR5A2O00482 541 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ZNF195O14628 629 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 AURKAO14965 403 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 LTFP02788 710 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SDC4P31431 198 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ARRB2P32121 409 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TCF7P36402 384 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SQLEQ14534 574 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 OXA1LQ15070 435 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CYP51A1Q16850 503 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 DGUOKQ16854 277 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 KIZQ2M2Z5 673 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 C15orf59Q2T9L4 293 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PPP2R2DQ66LE6 453 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 NAPRTQ6XQN6 538 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 LDHDQ86WU2 507 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PLD3Q8IV08 490 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MMAAQ8IVH4 418 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PLD5Q8N7P1 536 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 Q8N9G6 341 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 GMCL1P1Q8NEA9 526 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 URGCPQ8TCY9 931 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SLC7A3Q8WY07 619 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 POLE4Q9NR33 117 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 BFARQ9NZS9 450 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MTRRQ9UBK8 725 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SFMBT1Q9UHJ3 866 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ADAM28Q9UKQ2 775 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 OAZ3Q9UMX2 235 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ILVBLA1L0T0 632 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 TK2O00142 265 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-209ENST00000487188 TIMM44O43615 452 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 DDHD2O94830 711 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 LDLRP01130 860 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 IL1R1P14778 569 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 ITGB5P18084 799 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 SFNP31947 248 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 CASP2P42575 452 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 RPS9P46781 194 aaKnown RBP6.31□□□□□ -1.4
VPS13D-209ENST00000487188 HSD17B4P51659 736 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 LSM3P62310 102 aaKnown RBP6.31□□□□□ -1.4
VPS13D-209ENST00000487188 PHC1P78364 1004 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 IRF9Q00978 393 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 CTBSQ01459 385 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 CREB5Q02930 508 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 DLG2Q15700 870 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 DOK7Q18PE1 504 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 NHSL2Q5HYW2 709 aa6.31□□□□□ -1.4
VPS13D-209ENST00000487188 DCLRE1AQ6PJP8 1040 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms