RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CHFRQ96EP1 664 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 SAAL1Q96ER3 474 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 KLHL15Q96M94 604 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 TEFMQ96QE5 360 aaKnown RBP5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 FRG2BQ96QU4 278 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 PIMREGQ9BSJ6 248 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 HEMGNQ9BXL5 484 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CXorf56Q9H5V9 222 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 BRF2Q9HAW0 419 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ATP8A2Q9NTI2 1148 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 MPP6Q9NZW5 540 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 HSPB7Q9UBY9 170 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 LAS1LQ9Y4W2 734 aaKnown RBP5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CLDN16Q9Y5I7 305 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ARHGEF40Q8TER5 1519 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 STRCQ7RTU9 1775 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 WDR17Q8IZU2 1322 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 A0A1W2PQM1 296 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 LDLRAD4O15165 306 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 DOK2O60496 412 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 UGDHO60701 494 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 TACC1O75410 805 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 NEURL1O76050 574 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 IL1AP01583 271 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 WNT1P04628 370 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 MAPK4P31152 587 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 CTCFP49711 727 aaPredicted RBP5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 ELLP55199 621 aaPredicted RBP5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 TGFB2P61812 414 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 STIM1Q13586 685 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 MEX3CQ5U5Q3 659 aaKnown RBP5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 STRIP1Q5VSL9 837 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 MIS18BP1Q6P0N0 1132 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 IL20RBQ6UXL0 311 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 ZNF66Q6ZN08 573 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 MOB3CQ70IA8 216 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 RRM2BQ7LG56 351 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 PRSS45Q7RTY3 260 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 PXKQ7Z7A4 578 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 SLC16A11Q8NCK7 471 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 BCAS4Q8TDM0 211 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 FAR1Q8WVX9 515 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 RANBP17Q9H2T7 1088 aaKnown RBP5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 RIOX1Q9H6W3 641 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 ENTPD7Q9NQZ7 604 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 PDGFCQ9NRA1 345 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 BABAM1Q9NWV8 329 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 GRHL1Q9NZI5 618 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 UTS2RQ9UKP6 389 aa5.3□□□□□ -1.56
PRPF38A-203ENST00000487160 CARMIL1Q5VZK9 1371 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 DPPA5A6NC42 116 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 A6NCN8 305 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 TIPRLO75663 272 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 NUDT3O95989 172 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 GALTP07902 379 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 SPARCP09486 303 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 ICAM3P32942 547 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 CIITAP33076 1130 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 HSPA2P54652 639 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 NAP1L1P55209 391 aaKnown RBP5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 CYP4A11Q02928 519 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 CFHR1Q03591 330 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 PMPCAQ10713 525 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 PDE1CQ14123 709 aaPredicted RBP5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 ME3Q16798 604 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 EDRF1Q3B7T1 1238 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 FAM205BPQ63HN1 556 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 FASTKD5Q7L8L6 764 aaKnown RBP5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 TADA2BQ86TJ2 420 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 WDR5BQ86VZ2 330 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 NME8Q8N427 588 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 ZMIZ2Q8NF64 920 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 GDPD5Q8WTR4 605 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 KLHL29Q96CT2 875 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 PERPQ96FX8 193 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 NEUROD6Q96NK8 337 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 PIP5K1AQ99755 562 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 TREX2Q9BQ50 279 aaPredicted RBP5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 SDF4Q9BRK5 362 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 ITPAQ9BY32 194 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 R3HDMLQ9H3Y0 253 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 SNTG1Q9NSN8 517 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 DIAPH3Q9NSV4 1193 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 FBXO40Q9UH90 709 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 LAMP3Q9UQV4 416 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 MST1RQ04912 1400 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 TTC37Q6PGP7 1564 aa5.29□□□□□ -1.56
PRPF38A-203ENST00000487160 ARHGAP10A1A4S6 786 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 PTP4A3O75365 173 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 SLPIP03973 132 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 PRKCGP05129 697 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 LCKP06239 509 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 CENPBP07199 599 aaPredicted RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 MPGP29372 298 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms