RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 C19orf48Q6RUI8 117 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 NLRP14Q86W24 1093 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 PCDH20Q8N6Y1 951 aaKnown RBP25.03■■□□□ 1.6
LIME1-206ENST00000487026 CENPIQ92674 756 aaPredicted RBP25.03■■□□□ 1.6
LIME1-206ENST00000487026 GBP4Q96PP9 640 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 HEPHQ9BQS7 1158 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 TM6SF2Q9BZW4 377 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 SEPT11Q9NVA2 429 aaKnown RBP25.03■■□□□ 1.6
LIME1-206ENST00000487026 LGALS16A8MUM7 142 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 LRIG2O94898 1065 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 PLEKP08567 350 aaPredicted RBP25.02■■□□□ 1.6
LIME1-206ENST00000487026 RHOQP17081 205 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 GKP32189 559 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 CCNHP51946 323 aaPredicted RBP25.02■■□□□ 1.6
LIME1-206ENST00000487026 NRG1Q02297 640 aaPredicted RBP25.02■■□□□ 1.6
LIME1-206ENST00000487026 CYP4F3Q08477 520 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 STX1AQ16623 288 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 STRADAQ7RTN6 431 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 ANKRD20A12PQ8NF67 263 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 ARHGEF2Q92974 986 aaKnown RBP25.02■■□□□ 1.6
LIME1-206ENST00000487026 PPP1R16AQ96I34 528 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 SELENOOQ9BVL4 669 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 ZDHHC6Q9H6R6 413 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 LHX6Q9UPM6 363 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 DAAM1Q9Y4D1 1078 aa25.02■■□□□ 1.6
LIME1-206ENST00000487026 COL5A1P20908 1838 aaPredicted RBP25.02■■□□□ 1.6
LIME1-206ENST00000487026 ACADVLP49748 655 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 MAPK8IP2Q13387 824 aaPredicted RBP25.01■■□□□ 1.59
LIME1-206ENST00000487026 PHF13Q86YI8 300 aaPredicted RBP25.01■■□□□ 1.59
LIME1-206ENST00000487026 PYROXD2Q8N2H3 581 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 RYBPQ8N488 228 aaPredicted RBP25.01■■□□□ 1.59
LIME1-206ENST00000487026 OR13H1Q8NG92 308 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 OR6K2Q8NGY2 324 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 TSC1Q92574 1164 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 CALN1Q9BXU9 219 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 TMEM248Q9NWD8 314 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 NEU3Q9UQ49 428 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 RAXQ9Y2V3 346 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 PCDHGA1Q9Y5H4 931 aa25.01■■□□□ 1.59
LIME1-206ENST00000487026 RFPL3O75679 317 aa25■■□□□ 1.59
LIME1-206ENST00000487026 ADRB3P13945 408 aa25■■□□□ 1.59
LIME1-206ENST00000487026 GPD1P21695 349 aa25■■□□□ 1.59
LIME1-206ENST00000487026 ITGB7P26010 798 aa25■■□□□ 1.59
LIME1-206ENST00000487026 AKT2P31751 481 aa25■■□□□ 1.59
LIME1-206ENST00000487026 L1CAMP32004 1257 aa25■■□□□ 1.59
LIME1-206ENST00000487026 MAPKAPK2P49137 400 aa25■■□□□ 1.59
LIME1-206ENST00000487026 NEK3P51956 506 aa25■■□□□ 1.59
LIME1-206ENST00000487026 NCAPHQ15003 741 aa25■■□□□ 1.59
LIME1-206ENST00000487026 FBXL19Q6PCT2 694 aa25■■□□□ 1.59
LIME1-206ENST00000487026 APTXQ7Z2E3 356 aaKnown RBP25■■□□□ 1.59
LIME1-206ENST00000487026 TMPRSS12Q86WS5 348 aa25■■□□□ 1.59
LIME1-206ENST00000487026 SLC25A45Q8N413 288 aa25■■□□□ 1.59
LIME1-206ENST00000487026 TBC1D31Q96DN5 1066 aa25■■□□□ 1.59
LIME1-206ENST00000487026 AGPAT1Q99943 283 aa25■■□□□ 1.59
LIME1-206ENST00000487026 HSD3B7Q9H2F3 369 aa25■■□□□ 1.59
LIME1-206ENST00000487026 CELSR3Q9NYQ7 3312 aa25■■□□□ 1.59
LIME1-206ENST00000487026 ARID1BQ8NFD5 2236 aaPredicted RBP25■■□□□ 1.59
LIME1-206ENST00000487026 APC2O95996 2303 aa25■■□□□ 1.59
LIME1-206ENST00000487026 LRRC10BA6NIK2 292 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 SIGLEC16A6NMB1 481 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 CALB1P05937 261 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 JUPP14923 745 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 HNRNPA2B1P22626 353 aaKnown RBP24.99■■□□□ 1.59
LIME1-206ENST00000487026 TMEM259Q4ZIN3 620 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 GCNT7Q6ZNI0 430 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 PARS2Q7L3T8 475 aaKnown RBP24.99■■□□□ 1.59
LIME1-206ENST00000487026 C3orf20Q8ND61 904 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 ERGIC2Q96RQ1 377 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 MAGEH1Q9H213 219 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 UCKL1Q9NWZ5 548 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 GPSM3Q9Y4H4 160 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 FADS3Q9Y5Q0 445 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 ITPR1Q14643 2758 aa24.99■■□□□ 1.59
LIME1-206ENST00000487026 NBEAQ8NFP9 2946 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 TRIM38O00635 465 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 PAK4O96013 591 aaPredicted RBP24.98■■□□□ 1.59
LIME1-206ENST00000487026 C1SP09871 688 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 ETFBP38117 255 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 GSCP56915 257 aaPredicted RBP24.98■■□□□ 1.59
LIME1-206ENST00000487026 FGL2Q14314 439 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 POLD3Q15054 466 aaPredicted RBP24.98■■□□□ 1.59
LIME1-206ENST00000487026 SCYL2Q6P3W7 929 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 MON1BQ7L1V2 547 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 SLFN11Q7Z7L1 901 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 PDCD7Q8N8D1 485 aaKnown RBP24.98■■□□□ 1.59
LIME1-206ENST00000487026 NETO2Q8NC67 525 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 ISG20Q96AZ6 181 aaKnown RBP24.98■■□□□ 1.59
LIME1-206ENST00000487026 FEM1CQ96JP0 617 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 SLC17A9Q9BYT1 436 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 KLHL11Q9NVR0 708 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 HPCAL4Q9UM19 191 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 ACACAQ13085 2346 aa24.98■■□□□ 1.59
LIME1-206ENST00000487026 KNTC1P50748 2209 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 KRIT1O00522 736 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 CCP110O43303 1012 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 SIGLEC6O43699 453 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 RAMP2O60895 175 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 ATP1A3P13637 1013 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 CKMT2P17540 419 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 DGKAP23743 735 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms