RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 FAM187AA6NFU0 413 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 TTC34A8MYJ7 566 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 GJB3O75712 270 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 METTL18O95568 372 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 GSRP00390 522 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 KRT14P02533 472 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 CHRNB1P11230 501 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 NFKB1P19838 968 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 CD72P21854 359 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 PRKCHP24723 683 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 TARSP26639 723 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 RPL22P35268 128 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 MAXP61244 160 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 RHOAP61586 193 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 MRPS25P82663 173 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 ZXDAP98168 799 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 NSUN2Q08J23 767 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 HNRNPA1L2Q32P51 320 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 FBXO43Q4G163 708 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 EMC10Q5UCC4 262 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 ITPRIPL1Q6GPH6 555 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 Q6ZVU0 165 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 GSTA5Q7RTV2 222 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 MAATS1Q7Z4T9 603 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 SIX5Q8N196 739 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 BBS5Q8N3I7 341 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF513Q8N8E2 541 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 OR2AP1Q8NGE2 309 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC26Q8TAB7 109 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 ARRDC2Q8TBH0 407 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 CCHCR1Q8TD31 782 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 SHDQ96IW2 340 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 EXOC2Q96KP1 924 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 NSMCE3Q96MG7 304 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 FCRL5Q96RD9 977 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 UHRF1Q96T88 793 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 ACOX2Q99424 681 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 GABRG3Q99928 467 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 TRIM51Q9BSJ1 452 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
MCF2L-227ENST00000486806 GLOD4Q9HC38 313 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 LTB4R2Q9NPC1 389 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 FBXL21Q9UKT6 434 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 PLA2G4CQ9UP65 541 aa9.72□□□□□ -0.85
MCF2L-227ENST00000486806 MYOFQ9NZM1 2061 aa9.71□□□□□ -0.85
MCF2L-227ENST00000486806 KANSL1LA0AUZ9 987 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 EFCAB8A8MWE9 144 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 RNF40O75150 1001 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 IGSF6O95976 241 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 MMP2P08253 660 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 IVDP26440 423 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PSMB4P28070 264 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 NNMTP40261 264 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 MAGEA6P43360 314 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 CSNK1DP48730 415 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SEC13P55735 322 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 ST8SIA6P61647 398 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 DSC2Q02487 901 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 NIPAL4Q0D2K0 466 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 FZD5Q13467 585 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SEMA5AQ13591 1074 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 IHHQ14623 411 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 E2F5Q15329 346 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PPP1R7Q15435 360 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 TRIP13Q15645 432 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 DLG2Q15700 870 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SLC14A2Q15849 920 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PARP6Q2NL67 630 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 HSF5Q4G112 596 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 RALGPS1Q5JS13 557 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 ATXN7L2Q5T6C5 722 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SERPINA13PQ6UXR4 307 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 C4orf22Q6V702 233 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 ARHGEF18Q6ZSZ5 1173 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PID1Q7Z2X4 250 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PRPF39Q86UA1 669 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 IL17RCQ8NAC3 791 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 OR2A12Q8NGT7 310 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SEC14L1Q92503 715 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 PTPRN2Q92932 1015 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 IMP4Q96G21 291 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 OXNAD1Q96HP4 312 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 GDAP1L1Q96MZ0 367 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 NUDCD1Q96RS6 583 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 MLPHQ9BV36 600 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 TM6SF2Q9BZW4 377 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 SLC25A51Q9H1U9 297 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 TNKS2Q9H2K2 1166 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 CD248Q9HCU0 757 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 ZDHHC4Q9NPG8 344 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms