RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 PHACTR2O75167 634 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 PLEKP08567 350 aaPredicted RBP10.09□□□□□ -0.79
SND1-213ENST00000486037 COL8A1P27658 744 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
SND1-213ENST00000486037 SLC6A4P31645 630 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 UGT1A5P35504 534 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 UQCRFS1P47985 274 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 CLDN2P57739 230 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 CDK17Q00537 523 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 OVGP1Q12889 678 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 TRPC3Q13507 836 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 ASIC2Q16515 512 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
SND1-213ENST00000486037 BHLHA9Q7RTU4 235 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 IRF2BP2Q7Z5L9 587 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 TADA2BQ86TJ2 420 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 ZFAND4Q86XD8 727 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 JAMLQ86YT9 394 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 PTPRN2Q92932 1015 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 MIB2Q96AX9 1013 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 TMA16Q96EY4 203 aaKnown RBP10.09□□□□□ -0.79
SND1-213ENST00000486037 SPAG5Q96R06 1193 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 STK33Q9BYT3 514 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
SND1-213ENST00000486037 VRTNQ9H8Y1 702 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 AIPL1Q9NZN9 384 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 STOML2Q9UJZ1 356 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 SARDHQ9UL12 918 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 PCDHGA7Q9Y5G6 932 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 ADGRG4Q8IZF6 3080 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 A1L4Q6 167 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 EME2A4GXA9 379 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 USP27XA6NNY8 438 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 PRAMEF26H0Y7S4 382 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 FOXN3O00409 490 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 PLD2O14939 933 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 SLC31A1O15431 190 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 MSI1O43347 362 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 NRDCO43847 1150 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 TBL1XO60907 577 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 GFPT2O94808 682 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ASS1P00966 412 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 IL1BP01584 269 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ALPPL2P10696 532 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 LIPCP11150 499 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 C5AR1P21730 350 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ATICP31939 592 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 SOX5P35711 763 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 STAT1P42224 750 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 HARS2P49590 506 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 PSEN1P49768 467 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 STK19P49842 368 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 TAS2R38P59533 333 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 KCNAB2Q13303 367 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 PDAP1Q13442 181 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 DEFB133Q30KQ1 61 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ZNF699Q32M78 642 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ZNF667Q5HYK9 610 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 MANEAQ5SRI9 462 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 AGBL4Q5VU57 503 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 GCNT7Q6ZNI0 430 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 TRIM69Q86WT6 500 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 PPM1KQ8N3J5 372 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ZNF548Q8NEK5 533 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 PLD4Q96BZ4 506 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 RPL10LQ96L21 214 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 PRICKLE1Q96MT3 831 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 DESI2Q9BSY9 194 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 USP29Q9HBJ7 922 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ZNF71Q9NQZ8 489 aaPredicted RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 ZNHIT6Q9NWK9 470 aaKnown RBP10.08□□□□□ -0.8
SND1-213ENST00000486037 STIM2Q9P246 746 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 KLF15Q9UIH9 416 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ACSL6Q9UKU0 697 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 ERVW-1Q9UQF0 538 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 DMTF1Q9Y222 760 aa10.08□□□□□ -0.8
SND1-213ENST00000486037 CELSR1Q9NYQ6 3014 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 MED13Q9UHV7 2174 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 EDDM13A0A1B0GTR0 161 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 MUSKO15146 869 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 MTSS1O43312 755 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 TCEA3O75764 348 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 CLSTN1O94985 981 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ADH1BP00325 375 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 SERPING1P05155 500 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 FERP16591 822 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 EIF4A3P38919 411 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 ETV5P41161 510 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 PRKCIP41743 596 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 POLE2P56282 527 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ST8SIA6P61647 398 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms