RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 NLRP14Q86W24 1093 aa21.3■■□□□ 1
LMBR1-217ENST00000485985 PHF13Q86YI8 300 aaPredicted RBP21.3■■□□□ 1
LMBR1-217ENST00000485985 MFSD2AQ8NA29 543 aa21.3■■□□□ 1
LMBR1-217ENST00000485985 TMIEQ8NEW7 156 aa21.3■■□□□ 1
LMBR1-217ENST00000485985 TSC1Q92574 1164 aa21.3■■□□□ 1
LMBR1-217ENST00000485985 CENPIQ92674 756 aaPredicted RBP21.3■■□□□ 1
LMBR1-217ENST00000485985 DMTF1Q9Y222 760 aa21.3■■□□□ 1
LMBR1-217ENST00000485985 LRRC10BA6NIK2 292 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 CD160O95971 181 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 ATP1A3P13637 1013 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 RFC1P35251 1148 aaPredicted RBP21.29■■□□□ 1
LMBR1-217ENST00000485985 ACVRL1P37023 503 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 BNIP3Q12983 259 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 SLC45A4Q5BKX6 768 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 MON1BQ7L1V2 547 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 AOPEPQ8N6M6 819 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 ANKRD20A12PQ8NF67 263 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 FAM172AQ8WUF8 416 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 ERVMER34-1Q9H9K5 563 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 ADAM22Q9P0K1 906 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 IL36AQ9UHA7 158 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 FARP1Q9Y4F1 1045 aaPredicted RBP21.29■■□□□ 1
LMBR1-217ENST00000485985 WASF2Q9Y6W5 498 aa21.29■■□□□ 1
LMBR1-217ENST00000485985 LRRK1Q38SD2 2015 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 TCRBV5S1A1TA0A578 114 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 RNGTTO60942 597 aaKnown RBP21.28■■□□□ 1
LMBR1-217ENST00000485985 LEFTY1O75610 366 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 LRIG2O94898 1065 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 PRNPP04156 253 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 KRT3P12035 628 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 PRLRP16471 622 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 RXRGP48443 463 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 TARDBPQ13148 414 aaKnown RBP eCLIP21.28■■□□□ 16e-10■■■□□ 17.6
LMBR1-217ENST00000485985 ARL13BQ3SXY8 428 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 SETMARQ53H47 684 aaPredicted RBP21.28■■□□□ 1
LMBR1-217ENST00000485985 ARSIQ5FYB1 569 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 SFMBT2Q5VUG0 894 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 C3orf20Q8ND61 904 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 KLK6Q92876 244 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 MYOCQ99972 504 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 CEP44Q9C0F1 390 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 OSBPL2Q9H1P3 480 aa21.28■■□□□ 1
LMBR1-217ENST00000485985 FCF1Q9Y324 198 aaKnown RBP21.28■■□□□ 1
LMBR1-217ENST00000485985 ANKRD36A6QL64 1941 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 SHROOM3Q8TF72 1996 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 A0A1W2PQU0 124 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 ITPKBP27987 946 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 NUDT1P36639 197 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 EIF2S3P41091 472 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 SEMG2Q02383 582 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 TYRO3Q06418 890 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 HES3Q5TGS1 186 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 RETSATQ6NUM9 610 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 RWDD4Q6NW29 188 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 FBXL19Q6PCT2 694 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 ERN2Q76MJ5 926 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 KANSL1Q7Z3B3 1105 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 IQCHQ86VS3 1027 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 OXR1Q8N573 874 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 PCDH20Q8N6Y1 951 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 TMEM145Q8NBT3 493 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 NRSN2Q9GZP1 204 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 FZD3Q9NPG1 666 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 SEPT11Q9NVA2 429 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 TMEM248Q9NWD8 314 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 TMEM63CQ9P1W3 806 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 DNAI1Q9UI46 699 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 ZFR2Q9UPR6 939 aaKnown RBP21.27■■□□□ 1
LMBR1-217ENST00000485985 AK5Q9Y6K8 562 aa21.27■■□□□ 1
LMBR1-217ENST00000485985 PRAMEF26H0Y7S4 382 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 CCP110O43303 1012 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 TLX3O43711 291 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-217ENST00000485985 MBD3O95983 291 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 CALB1P05937 261 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 RHOQP17081 205 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 GPD1P21695 349 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 RECQLP46063 649 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-217ENST00000485985 MAPKAPK2P49137 400 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 CCNHP51946 323 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-217ENST00000485985 RTP5Q14D33 572 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 ZNF284Q2VY69 593 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 WDR59Q6PJI9 974 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 HORMAD1Q86X24 394 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 ARHGEF2Q92974 986 aaKnown RBP21.26■□□□□ 0.99
LMBR1-217ENST00000485985 NTAN1Q96AB6 310 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 TBC1D31Q96DN5 1066 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 UBL7Q96S82 380 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-217ENST00000485985 AGPAT1Q99943 283 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 SELENOOQ9BVL4 669 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 HDAC8Q9BY41 377 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 TM6SF2Q9BZW4 377 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 DYRK4Q9NR20 520 aa21.26■□□□□ 0.99
LMBR1-217ENST00000485985 HELZ2Q9BYK8 2649 aaKnown RBP21.25■□□□□ 0.99
LMBR1-217ENST00000485985 SLC31A1O15431 190 aa21.25■□□□□ 0.99
LMBR1-217ENST00000485985 PLEKP08567 350 aaPredicted RBP21.25■□□□□ 0.99
LMBR1-217ENST00000485985 CKMT2P17540 419 aa21.25■□□□□ 0.99
LMBR1-217ENST00000485985 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
LMBR1-217ENST00000485985 ITGB7P26010 798 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms