RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 DUS1LQ6P1R4 473 aaKnown RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 MAMDC4Q6UXC1 1216 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FBXW8Q8N3Y1 598 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 URGCPQ8TCY9 931 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 TCF7L2Q9NQB0 619 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 UBP1Q9NZI7 540 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 SF3B1O75533 1304 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■■■ 145.3
SGSM3-213ENST00000485962 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FAM72CH0Y354 149 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 PIRO00625 290 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 TRIM13O60858 407 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 C2P06681 752 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 TPH1P17752 444 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 NUDT2P50583 147 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 COX10Q12887 443 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 ANKRD20A4Q4UJ75 823 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FAM72AQ5TYM5 149 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FAM72DQ6L9T8 149 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 PGM2L1Q6PCE3 622 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 PDZD4Q76G19 769 aaPredicted RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 KCNMB4Q86W47 210 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FAM72BQ86X60 149 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 WNT8BQ93098 351 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 KCNK16Q96T55 309 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 IARS2Q9NSE4 1012 aaKnown RBP12.53□□□□□ -0.4
SGSM3-213ENST00000485962 ADAM28Q9UKQ2 775 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 SLC39A10Q9ULF5 831 aa12.53□□□□□ -0.4
SGSM3-213ENST00000485962 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.4
SGSM3-213ENST00000485962 AP2A1O95782 977 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 LTFP02788 710 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 MPOP05164 745 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 CHRNGP07510 517 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 RPL34P49207 117 aaKnown RBP12.52□□□□□ -0.4
SGSM3-213ENST00000485962 CCNA1P78396 465 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 DPYSQ14117 519 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.4
SGSM3-213ENST00000485962 MMEL1Q495T6 779 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 PAF1Q8N7H5 531 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 TSNARE1Q96NA8 513 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 NPY6RQ99463 290 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 DUSP16Q9BY84 665 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 TASP1Q9H6P5 420 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 WDR55Q9H6Y2 383 aaPredicted RBP12.52□□□□□ -0.4
SGSM3-213ENST00000485962 CHRAC1Q9NRG0 131 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 TMCO1Q9UM00 188 aa12.52□□□□□ -0.4
SGSM3-213ENST00000485962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.41
SGSM3-213ENST00000485962 G3V2L1 256 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 ACSL4O60488 711 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 PENKP01210 267 aaPredicted RBP12.52□□□□□ -0.41
SGSM3-213ENST00000485962 NPR3P17342 541 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 MPSTP25325 297 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 TKTL1P51854 596 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 SV2CQ496J9 727 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 ACAD11Q709F0 780 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 SCYL1Q96KG9 808 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 CENPKQ9BS16 269 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 GATA5Q9BWX5 397 aaPredicted RBP12.52□□□□□ -0.41
SGSM3-213ENST00000485962 ILKAPQ9H0C8 392 aaPredicted RBP12.52□□□□□ -0.41
SGSM3-213ENST00000485962 ADAMTS10Q9H324 1103 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
SGSM3-213ENST00000485962 ZCWPW2A0A1B0GU75 182 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 DCLK1O15075 740 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
SGSM3-213ENST00000485962 MMP3P08254 477 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 UQCRBP14927 111 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 GLRBP48167 497 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 CENPAP49450 140 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 PGGT1BP53609 377 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-213ENST00000485962 PPIL2Q13356 520 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 MSLNQ13421 630 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-213ENST00000485962 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 VPS39Q96JC1 886 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 B3GNT4Q9C0J1 378 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 RIMKLBQ9ULI2 386 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 TMEM114B3SHH9 223 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 TK2O00142 265 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SGSM3-213ENST00000485962 EPHA3P29320 983 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 ADRA1BP35368 520 aa12.51□□□□□ -0.41
SGSM3-213ENST00000485962 AVPR1AP37288 418 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms