RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 BMFQ96LC9 184 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 HEPHQ9BQS7 1158 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 CEP44Q9C0F1 390 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 NDFIP2Q9NV92 336 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 TAB2Q9NYJ8 693 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 PPARGC1AQ9UBK2 798 aaKnown RBP19.62■□□□□ 0.73
COL27A1-205ENST00000485397 FADS3Q9Y5Q0 445 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 MYLKQ15746 1914 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 PAK4O96013 591 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-205ENST00000485397 MYF5P13349 255 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 ADRB3P13945 408 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 L1CAMP32004 1257 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 EIF2S3P41091 472 aaKnown RBP19.61■□□□□ 0.73
COL27A1-205ENST00000485397 CCNHP51946 323 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-205ENST00000485397 CDO1Q16878 200 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 C15orf59Q2T9L4 293 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-205ENST00000485397 TCP11X2Q5H9J9 407 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 DCBLD1Q8N8Z6 715 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 SLC17A9Q9BYT1 436 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 MAGEB5Q9BZ81 275 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 DACH1Q9UI36 760 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 HS3ST3A1Q9Y663 406 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 TDRD6O60522 2096 aaKnown RBP19.61■□□□□ 0.73
COL27A1-205ENST00000485397 DOCK4Q8N1I0 1966 aa19.61■□□□□ 0.73
COL27A1-205ENST00000485397 RAD51BO15315 384 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 GFPT2O94808 682 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 GJB6O95452 261 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 MT-CO3P00414 261 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 ITGB7P26010 798 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 GKP32189 559 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 KLK7P49862 253 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 E2F1Q01094 437 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 HS1BP3Q53T59 392 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 KDM7AQ6ZMT4 941 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 PARS2Q7L3T8 475 aaKnown RBP19.6■□□□□ 0.73
COL27A1-205ENST00000485397 ARCQ7LC44 396 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 PTAR1Q7Z6K3 402 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-205ENST00000485397 CACTIN-AS1Q8N1I8 211 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 RXFP2Q8WXD0 754 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 FEM1CQ96JP0 617 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 TM6SF2Q9BZW4 377 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 GANQ9H2C0 597 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 DNAJC28Q9NX36 388 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 HECAQ9UBI9 543 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-205ENST00000485397 NOCTQ9UK39 431 aaKnown RBP19.6■□□□□ 0.73
COL27A1-205ENST00000485397 NBEAQ8NFP9 2946 aa19.6■□□□□ 0.73
COL27A1-205ENST00000485397 TRPM6Q9BX84 2022 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 POM121BA6NF01 834 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 A6NNZ2 444 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 BRINP1O60477 761 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 CYP1A1P04798 512 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-205ENST00000485397 CHRNB2P17787 502 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 ADRA1BP35368 520 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 RPS21P63220 83 aaKnown RBP19.59■□□□□ 0.73
COL27A1-205ENST00000485397 CCDC14Q49A88 953 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 MANEALQ5VSG8 457 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 KIAA1161Q6NSJ0 714 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 LRRC69Q6ZNQ3 347 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 OR6K2Q8NGY2 324 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 JOSD2Q8TAC2 188 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 NUP62CLQ9H1M0 184 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 ZDHHC6Q9H6R6 413 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 GPR27Q9NS67 375 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 OR12D3Q9UGF7 316 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 RAI2Q9Y5P3 530 aa19.59■□□□□ 0.73
COL27A1-205ENST00000485397 FAM72CH0Y354 149 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 NEBLO76041 1014 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 CKMT1AP12532 417 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 MMP8P22894 467 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 EEF1GP26641 437 aaKnown RBP19.58■□□□□ 0.72
COL27A1-205ENST00000485397 ABL2P42684 1182 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 FMO1Q01740 532 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 CDR2Q01850 454 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 FAM72AQ5TYM5 149 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 FAM72DQ6L9T8 149 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 RWDD4Q6NW29 188 aaKnown RBP19.58■□□□□ 0.72
COL27A1-205ENST00000485397 KYAT3Q6YP21 454 aaKnown RBP19.58■□□□□ 0.72
COL27A1-205ENST00000485397 LEKR1Q6ZMV7 388 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 NLRP14Q86W24 1093 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 FAM72BQ86X60 149 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 ZNF677Q86XU0 584 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 RYBPQ8N488 228 aaPredicted RBP19.58■□□□□ 0.72
COL27A1-205ENST00000485397 SLC30A5Q8TAD4 765 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 GPT2Q8TD30 523 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 ARHGEF2Q92974 986 aaKnown RBP19.58■□□□□ 0.72
COL27A1-205ENST00000485397 IFT43Q96FT9 208 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 APOLD1Q96LR9 279 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 C11orf70Q9BRQ4 267 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 VPS16Q9H269 839 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 NLGN3Q9NZ94 848 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 DNAI1Q9UI46 699 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 PCDHB1Q9Y5F3 818 aa19.58■□□□□ 0.72
COL27A1-205ENST00000485397 LY6G6EA0A0G2JKS1 128 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 IGLON5A6NGN9 336 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 C2CD4BA6NLJ0 364 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 AP1G1O43747 822 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 RHOQP17081 205 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 SDC4P31431 198 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 NRG1Q02297 640 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms