RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 ACSL6Q9UKU0 697 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 PADI4Q9UM07 663 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 HPSEQ9Y251 543 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 E5RJQ4 531 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 LMO7DNF2Z398 122 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 YY2O15391 372 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 LEFTY1O75610 366 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CNTN5O94779 1100 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 ENDOD1O94919 500 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 PRNPP04156 253 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CELA2BP08218 269 aaPredicted RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 LIPCP11150 499 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 ADRB3P13945 408 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 RPIAP49247 311 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 PFN3P60673 137 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 RPS21P63220 83 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CCDC15Q0P6D6 951 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 STILQ15468 1287 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 KIAA1161Q6NSJ0 714 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 ZFAND4Q86XD8 727 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 PPM1KQ8N3J5 372 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 WDR48Q8TAF3 677 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 NAT6Q93015 286 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CCDC114Q96M63 670 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 FUCA2Q9BTY2 467 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC4A5Q9BY07 1137 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 CLPBQ9H078 707 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 DDIT4Q9NX09 232 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 APOBEC3BQ9UH17 382 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 IL36AQ9UHA7 158 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC12A6Q9UHW9 1150 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 GGT7Q9UJ14 662 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 TBC1D30Q9Y2I9 924 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 FADS3Q9Y5Q0 445 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 HS3ST4Q9Y661 456 aa11.1□□□□□ -0.63
SMARCC1-205ENST00000483847 ZFC3H1O60293 1989 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 A0A1W2PQM1 296 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 IGLON5A6NGN9 336 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 D6RAR5 112 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 FPGTO14772 594 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PPFIA2O75334 1257 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 ZNF821O75541 412 aaPredicted RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 F13A1P00488 732 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 SFTPCP11686 197 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 TSHRP16473 764 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 ITIH1P19827 911 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 CR2P20023 1033 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 CMA1P23946 247 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 CCR1P32246 355 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 NEK3P51956 506 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 INHBCP55103 352 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 CCL7P80098 99 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 TCEA2Q15560 299 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 ALFQ53S48 1182 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 MANEAQ5SRI9 462 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 C22orf39Q6P5X5 142 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PARS2Q7L3T8 475 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 RRAGAQ7L523 313 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PTRH1Q86Y79 214 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PHACTR4Q8IZ21 702 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 KYQ8NBH2 561 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 GLMNQ92990 594 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 NT5C1BQ96P26 610 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC25A18Q9H1K4 315 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 EPN3Q9H201 632 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PISDQ9UG56 409 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 ITM2BQ9Y287 266 aa11.09□□□□□ -0.63
SMARCC1-205ENST00000483847 PRAMEF33A0A0G2JMD5 474 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 CLEC18AA5D8T8 446 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 K7ELQ4 463 aaPredicted RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 NVLO15381 856 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 PRAMEF10O60809 474 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 PAGE1O75459 146 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 CLDN11O75508 207 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ANXA6P08133 673 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 RHOCP08134 193 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SLC2A3P11169 496 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ITGB7P26010 798 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ETV5P41161 510 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms