RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MYD88Q99836 296 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 ARPC5LQ9BPX5 153 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 LHPPQ9H008 270 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 BRD8Q9H0E9 1235 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 ACAD9Q9H845 621 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC22A11Q9NSA0 550 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 WDR81Q562E7 1941 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 EFCAB8A8MWE9 144 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 NTN3O00634 580 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 BUB3O43684 328 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 ITM2AO43736 263 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SERPINI2O75830 405 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 DDAH2O95865 285 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 UMODP07911 640 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 CYP21A2P08686 494 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 ENO3P13929 434 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 BDNFP23560 247 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 TECP42680 631 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 HTR3AP46098 478 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 CLCNKBP51801 687 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 HILS1P60008 231 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 POU3F1Q03052 451 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 FOXD4Q12950 439 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 TBRG1Q3YBR2 411 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 GALNTL6Q49A17 601 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 ATPAF1Q5TC12 328 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 GGT6Q6P531 493 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SRLQ86TD4 932 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SERPINA11Q86U17 422 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 WDR5BQ86VZ2 330 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SCN4BQ8IWT1 228 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SMAP1Q8IYB5 467 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 FAM186BQ8IYM0 893 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 ENAHQ8N8S7 591 aaPredicted RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 GPATCH11Q8N954 259 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 TEX19Q8NA77 164 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 TMEM163Q8TC26 289 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC2A12Q8TD20 617 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 HDAC7Q8WUI4 952 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 FRG2BQ96QU4 278 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 NODALQ96S42 347 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC25A33Q9BSK2 321 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 RTKNQ9BST9 563 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 IFT27Q9BW83 186 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 OBP2BQ9NPH6 170 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 NLRC4Q9NPP4 1024 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 TCF7L2Q9NQB0 619 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 DONSONQ9NYP3 566 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 SEL1LQ9UBV2 794 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 AGO1Q9UL18 857 aaKnown RBP3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 DAPP1Q9UN19 280 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 DAAM1Q9Y4D1 1078 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
LAPTM4A-202ENST00000483117 C17orf102A2RUQ5 167 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 LGALS16A8MUM7 142 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 EYA2O00167 538 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SYN3O14994 580 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 C21orf33P30042 268 aaPredicted RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 AVPR2P30518 371 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 PPM1AP35813 382 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 CASP2P42575 452 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TRAPPC10P48553 1259 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 CTTNQ14247 550 aaKnown RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 PTK2BQ14289 1009 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 RPS6KA2Q15349 733 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SF3B4Q15427 424 aaKnown RBP eCLIP3.28□□□□□ -1.885e-7■■■■□ 22.6
LAPTM4A-202ENST00000483117 ZRSR1Q15695 479 aaKnown RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 LRRC24Q50LG9 513 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 C10orf62Q5T681 223 aaPredicted RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TMEM268Q5VZI3 342 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 CCDC70Q6NSX1 233 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 FBXL22Q6P050 247 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 NFRKBQ6P4R8 1299 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SYNE3Q6ZMZ3 975 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 MEX3BQ6ZN04 569 aaKnown RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 ZDHHC23Q8IYP9 409 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TEX45Q8NA69 505 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SCAMP5Q8TAC9 235 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TMEM41AQ96HV5 264 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TXNDC15Q96J42 360 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 PIGSQ96S52 555 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 CADM1Q9BY67 442 aaKnown RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SPRY4Q9C004 299 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 CLPBQ9H078 707 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 GAREM1Q9H706 876 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 SDF2L1Q9HCN8 221 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 UPB1Q9UBR1 384 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 KLQ9UEF7 1012 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 TAGLN3Q9UI15 199 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 OSGIN2Q9Y236 505 aa3.28□□□□□ -1.88
LAPTM4A-202ENST00000483117 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 TARSL2A2RTX5 802 aaKnown RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMEM247A6NEH6 219 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 GOLGA6L3A6NEY3 463 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 KDM4EB2RXH2 506 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms