RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SGCGQ13326 291 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 STILQ15468 1287 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 FBXL22Q6P050 247 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 TMEM270Q6UE05 265 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 BEND5Q7L4P6 421 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 ZFAND4Q86XD8 727 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 UBR7Q8N806 425 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 CHST14Q8NCH0 376 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 CCDC74AQ96AQ1 378 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 LRRC61Q9BV99 259 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 MUC3BQ9H195 1237 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 TCEAL2Q9H3H9 227 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-224ENST00000481929 GULP1Q9UBP9 304 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 IL36AQ9UHA7 158 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 UTP20O75691 2785 aaKnown RBP15.27■□□□□ 0.03
HDAC6-224ENST00000481929 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 RNF103O00237 685 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 YY2O15391 372 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 MT-CO1P00395 513 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 RPLP0P05388 317 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 EPB41P11171 864 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ADRB3P13945 408 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 RECQLP46063 649 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ME1P48163 572 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 THOP1P52888 689 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 PFN3P60673 137 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CCL7P80098 99 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 KCNAB2Q13303 367 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 PTK2BQ14289 1009 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ARSIQ5FYB1 569 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 TCERG1LQ5VWI1 586 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 BORAQ6PGQ7 559 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 SDR16C5Q8N3Y7 309 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ARL10Q8N8L6 244 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CCDC47Q96A33 483 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 C2orf49Q9BVC5 232 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 CPEB1Q9BZB8 566 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 UPF2Q9HAU5 1272 aaKnown RBP15.26■□□□□ 0.03
HDAC6-224ENST00000481929 LRRC4CQ9HCJ2 640 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ST7Q9NRC1 585 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 ANAPC2Q9UJX6 822 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 DOLKQ9UPQ8 538 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 MAPK8IP1Q9UQF2 711 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 FADS3Q9Y5Q0 445 aa15.26■□□□□ 0.03
HDAC6-224ENST00000481929 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 A0A1W2PQC6 194 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 K7ERQ8 282 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 M0QYT0 321 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 LEFTY1O75610 366 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 IGLV3-25P01717 112 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 MYL1P05976 194 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 SLC2A3P11169 496 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 ITIH1P19827 911 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 RRM1P23921 792 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 CD82P27701 267 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 CLCN6P51797 869 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
HDAC6-224ENST00000481929 LRMPQ12912 555 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 NCAPHQ15003 741 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 DCAF17Q5H9S7 520 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-224ENST00000481929 FAXCQ5TGI0 409 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 KYQ8NBH2 561 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 DENND6BQ8NEG7 585 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 SCG3Q8WXD2 468 aaKnown RBP15.25■□□□□ 0.03
HDAC6-224ENST00000481929 TMEM159Q96B96 161 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 KLF6Q99612 283 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-224ENST00000481929 ZSWIM1Q9BR11 485 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 FAM204AQ9H8W3 233 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 POPDC2Q9HBU9 364 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 FOXJ2Q9P0K8 574 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 RABGEF1Q9UJ41 708 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 TUBD1Q9UJT1 453 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 PCDHA7Q9UN72 937 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 COQ4Q9Y3A0 265 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 PCDHB4Q9Y5E5 795 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 SCN8AQ9UQD0 1980 aa15.25■□□□□ 0.03
HDAC6-224ENST00000481929 ICE1Q9Y2F5 2266 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 A0A1W2PQM1 296 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 IGLON5A6NGN9 336 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 AP1G1O43747 822 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 SNAP91O60641 907 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 CLDN11O75508 207 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 TSHRP16473 764 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 ITGB7P26010 798 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 CCR1P32246 355 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 ACADSBP45954 432 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 IRAK1P51617 712 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 POLE2P56282 527 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 PITX1P78337 314 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-224ENST00000481929 C22orf39Q6P5X5 142 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 DPY19L3Q6ZPD9 716 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms