RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 DUSP19Q8WTR2 217 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SNX21Q969T3 373 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SIPA1Q96FS4 1042 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 GBP5Q96PP8 586 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 TUBB6Q9BUF5 446 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 ALG8Q9BVK2 526 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 CADM1Q9BY67 442 aaKnown RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 ZNF768Q9H5H4 540 aaKnown RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 ZCCHC4Q9H5U6 513 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 TMEM248Q9NWD8 314 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 EHD3Q9NZN3 535 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 DLGAP2Q9P1A6 1054 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SEC63Q9UGP8 760 aaKnown RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 PADI1Q9ULC6 663 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 FZD4Q9ULV1 537 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 GPRASP1Q5JY77 1395 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 AOX1Q06278 1338 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ARHGAP10A1A4S6 786 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 OR6C68A6NDL8 312 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 FAM90A8PA6NJQ4 464 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 MCIDASD6RGH6 385 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 USP12O75317 370 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 CNTN5O94779 1100 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 NXPH3O95157 252 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ADAP00813 363 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ABCB1P08183 1280 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 CCDC175P0C221 793 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 FAM90A13PP0C7W8 464 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 FAM90A24PP0C7X0 464 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ATP5F1P24539 256 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 ATP6V1E1P36543 226 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 BMPR1AP36894 532 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 GP5P40197 560 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 BLKP51451 505 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 HDAC4P56524 1084 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 WDR5P61964 334 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 CAMK2DQ13557 499 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 BAATQ14032 418 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 CNGA3Q16281 694 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ERCC6LQ2NKX8 1250 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 EDRF1Q3B7T1 1238 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 BEAN1Q3B7T3 259 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 MMEL1Q495T6 779 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ZNF805Q5CZA5 627 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 KRBOX4Q5JUW0 171 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 SERTAD4-AS1Q5TG53 156 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 TCERG1LQ5VWI1 586 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 TXNDC8Q6A555 127 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 SLC30A9Q6PML9 568 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 IL20RBQ6UXL0 311 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 GLDNQ6ZMI3 551 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 PRSS45Q7RTY3 260 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 GPAT4Q86UL3 456 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 METTL23Q86XA0 190 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 RHPN2Q8IUC4 686 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 TMEM151BQ8IW70 566 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 CCDC170Q8IYT3 715 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 SCAIQ8N9R8 606 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 CPEB3Q8NE35 698 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 RP9Q8TA86 221 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 DEPDC1BQ8WUY9 529 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ZKSCAN4Q969J2 545 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 FUBP1Q96AE4 644 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 PTCD3Q96EY7 689 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 HS6ST2Q96MM7 605 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 RAB3IPQ96QF0 476 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 H2AFJQ9BTM1 129 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 MRPL1Q9BYD6 325 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.56□□□□□ -1.52
COPA-203ENST00000481040 XYLT2Q9H1B5 865 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 TRPV4Q9HBA0 871 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ENTPD7Q9NQZ7 604 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 KLC4Q9NSK0 619 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ARL15Q9NXU5 204 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 WSB2Q9NYS7 404 aaPredicted RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 OGFRQ9NZT2 677 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 ABI3Q9P2A4 366 aa5.56□□□□□ -1.52
COPA-203ENST00000481040 PPIEQ9UNP9 301 aaKnown RBP5.56□□□□□ -1.52
COPA-203ENST00000481040 NPEPPSL1A6NEC2 478 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 PRYO14603 147 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 ADAMDEC1O15204 470 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 PROM1O43490 865 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 TJP3O95049 919 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 GOSR1O95249 250 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 NDUFA10O95299 355 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 CBX6O95503 412 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 PLATP00750 562 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 SERPINC1P01008 464 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 HEXAP06865 529 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 IRF1P10914 325 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 KRT10P13645 584 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 DDX6P26196 483 aaKnown RBP eCLIP5.55□□□□□ -1.52
COPA-203ENST00000481040 TLX1P31314 330 aaPredicted RBP5.55□□□□□ -1.52
COPA-203ENST00000481040 GABRB2P47870 512 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 CAMPP49913 170 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 F2RL1P55085 397 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms