RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 WASF2Q9Y6W5 498 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 FFAR2O15552 330 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF821O75541 412 aaPredicted RBP15.54■□□□□ 0.08
LIMS3-203ENST00000480744 CDK4P11802 303 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 CKMT2P17540 419 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 NSFP46459 744 aaKnown RBP15.54■□□□□ 0.08
LIMS3-203ENST00000480744 JAM2P57087 298 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 HES3Q5TGS1 186 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 TRIM72Q6ZMU5 477 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 PTAR1Q7Z6K3 402 aaPredicted RBP15.54■□□□□ 0.08
LIMS3-203ENST00000480744 OR13H1Q8NG92 308 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 OR6K2Q8NGY2 324 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 TSC1Q92574 1164 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 NDFIP2Q9NV92 336 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 SEPT11Q9NVA2 429 aaKnown RBP15.54■□□□□ 0.08
LIMS3-203ENST00000480744 DKK4Q9UBT3 224 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 ZFR2Q9UPR6 939 aaKnown RBP15.54■□□□□ 0.08
LIMS3-203ENST00000480744 NBEAQ8NFP9 2946 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 ITPR1Q14643 2758 aa15.54■□□□□ 0.08
LIMS3-203ENST00000480744 C2CD4BA6NLJ0 364 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 FAM72CH0Y354 149 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 TRIM38O00635 465 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 SIGLEC6O43699 453 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 KRT3P12035 628 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ADRB3P13945 408 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 RHOQP17081 205 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ITGB7P26010 798 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 L1CAMP32004 1257 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ETFBP38117 255 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 PTPN9P43378 593 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 COPB1P53618 953 aaKnown RBP15.53■□□□□ 0.08
LIMS3-203ENST00000480744 DAB2P98082 770 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 TARDBPQ13148 414 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIMS3-203ENST00000480744 SYCP1Q15431 976 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 HS1BP3Q53T59 392 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 FAM72AQ5TYM5 149 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 FAM72DQ6L9T8 149 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 LEKR1Q6ZMV7 388 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 GCNT7Q6ZNI0 430 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 FAM72BQ86X60 149 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF354CQ86Y25 554 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 CCDC185Q8N715 623 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ANKRD20A12PQ8NF67 263 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 NEK11Q8NG66 645 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 NXPE2Q96DL1 559 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 TBC1D31Q96DN5 1066 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 DCBLD2Q96PD2 775 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 SELENOOQ9BVL4 669 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 MAGEB5Q9BZ81 275 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 KLHL11Q9NVR0 708 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 UCKL1Q9NWZ5 548 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 ADAM22Q9P0K1 906 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 HPCAL4Q9UM19 191 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 SIK3Q9Y2K2 1263 aa15.53■□□□□ 0.08
LIMS3-203ENST00000480744 A6NNZ2 444 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 LRIG2O94898 1065 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 PLEKP08567 350 aaPredicted RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 UNGP13051 313 aaPredicted RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 GPD1P21695 349 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 DGKAP23743 735 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 GKP32189 559 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 MAPKAPK2P49137 400 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 RPS21P63220 83 aaKnown RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 POLD3Q15054 466 aaPredicted RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 PROX2Q3B8N5 592 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 TMEM259Q4ZIN3 620 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 MANEALQ5VSG8 457 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 KIAA1161Q6NSJ0 714 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 SASS6Q6UVJ0 657 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 Q6ZSR6 202 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 PARS2Q7L3T8 475 aaKnown RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 STRADAQ7RTN6 431 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 PDZD3Q86UT5 571 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 SLC25A45Q8N413 288 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.08
LIMS3-203ENST00000480744 FEM1CQ96JP0 617 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 SLC17A9Q9BYT1 436 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 OSBPL2Q9H1P3 480 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 CAAP1Q9H8G2 361 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 DAAM1Q9Y4D1 1078 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 FADS3Q9Y5Q0 445 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 AK5Q9Y6K8 562 aa15.52■□□□□ 0.08
LIMS3-203ENST00000480744 KRIT1O00522 736 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 NEMP1O14524 444 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 RAMP2O60895 175 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 CD160O95971 181 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 PAK4O96013 591 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-203ENST00000480744 CALB1P05937 261 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 RFC1P35251 1148 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-203ENST00000480744 HDAC4P56524 1084 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 GEMIN4P57678 1058 aaKnown RBP15.51■□□□□ 0.07
LIMS3-203ENST00000480744 NRG1Q02297 640 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-203ENST00000480744 UBXN1Q04323 297 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 PTP4A2Q12974 167 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 ZNF211Q13398 564 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-203ENST00000480744 ILKQ13418 452 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 CLEC16AQ2KHT3 1053 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms