RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 CCDC117Q8IWD4 279 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 OR6Y1Q8NGX8 325 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 MFSD3Q96ES6 412 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 AGAP2Q99490 1192 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 SORT1Q99523 831 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 EBF4Q9BQW3 602 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 MCMBPQ9BTE3 642 aa19.44■□□□□ 0.7
TNFRSF8-204ENST00000479933 HNRNPRO43390 633 aaKnown RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 CIB2O75838 187 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 ZCCHC18P0CG32 403 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 DNAJB1P25685 340 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 CCR1P32246 355 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 MAGEA10P43363 369 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 TUBB3Q13509 450 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 BTBD8Q5XKL5 378 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 CD300LGQ6UXG3 332 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 ZBTB8BQ8NAP8 495 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 RBM15BQ8NDT2 890 aaKnown RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 RDH11Q8TC12 318 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 CELF6Q96J87 481 aaKnown RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 SUSD3Q96L08 255 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 FCRL5Q96RD9 977 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 SMOC2Q9H3U7 446 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 CHRAC1Q9NRG0 131 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 PCDHB12Q9Y5F1 795 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 FNDC1Q4ZHG4 1894 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 NLRC5Q86WI3 1866 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 YY1P25490 414 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 POLD2P49005 469 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 PRKAA2P54646 552 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 TMED1Q13445 227 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 UGP2Q16851 508 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 ANO4Q32M45 955 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 PCID2Q5JVF3 399 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 RABGAP1LQ5R372 815 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 NET1Q7Z628 596 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 LRRC49Q8IUZ0 686 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 VPS39Q96JC1 886 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 IARS2Q9NSE4 1012 aaKnown RBP19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 TMLHEQ9NVH6 421 aa19.43■□□□□ 0.7
TNFRSF8-204ENST00000479933 A0A0J9YVX5 310 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PRR5-ARHGAP8B1AHC4 643 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 DFFAO00273 331 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 MGEA5O60502 916 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TM7SF2O76062 418 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 IDO1P14902 403 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PHEXP78562 749 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 ARHGAP8P85298 464 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 KDSRQ06136 332 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PPP2R5DQ14738 602 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TIGD7Q6NT04 549 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 IZUMO2Q6UXV1 221 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 ADGRG6Q86SQ4 1221 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SPATA2LQ8IUW3 424 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SCUBE1Q8IWY4 988 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 CNTD1Q8N815 330 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SMYD1Q8NB12 490 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 OR10T2Q8NGX3 314 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PIP4K2CQ8TBX8 421 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PTCD2Q8WV60 388 aaKnown RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TSNARE1Q96NA8 513 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 IL12RB2Q99665 862 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 DDX50Q9BQ39 737 aaKnown RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TBL1YQ9BQ87 522 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 APOL2Q9BQE5 337 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TMEM165Q9HC07 324 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PLA2G4CQ9UP65 541 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 NEU3Q9UQ49 428 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SSX2IPQ9Y2D8 614 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 MATN3O15232 486 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SEPT4O43236 478 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 C2P06681 752 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 CPA2P48052 419 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 IDH3AP50213 366 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 GEMP55040 296 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SMAD1Q15797 465 aaKnown RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TRMT5Q32P41 509 aaKnown RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 PAN2Q504Q3 1202 aaKnown RBP19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 ZNF554Q86TJ5 538 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 LRRTM3Q86VH5 581 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 WDR60Q8WVS4 1066 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 GPR22Q99680 433 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 ADAM2Q99965 735 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 SIK2Q9H0K1 926 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 RHOJQ9H4E5 214 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 NMRAL1Q9HBL8 299 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 GLOD4Q9HC38 313 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 FNIP2Q9P278 1114 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TLK1Q9UKI8 766 aa19.42■□□□□ 0.7
TNFRSF8-204ENST00000479933 TRIM13O60858 407 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 PAGE1O75459 146 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 TPH1P17752 444 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 NMBRP28336 390 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 MANEALQ5VSG8 457 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 RGMBQ6NW40 437 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 PKN3Q6P5Z2 889 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 ARHGAP12Q8IWW6 846 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 ATXN7L3BQ96GX2 97 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 FAM161BQ96MY7 647 aa19.41■□□□□ 0.7
TNFRSF8-204ENST00000479933 GPAMQ9HCL2 828 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms