RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF516Q92618 1163 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 VPS33AQ96AX1 596 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 DUS3LQ96G46 650 aaKnown RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 SEZ6LQ9BYH1 1024 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 SNTG2Q9NY99 539 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 TESMINQ9Y4I5 508 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 CNTFP26441 200 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 CAPGP40121 348 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 EVA1CP58658 441 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 PICALMQ13492 652 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 TBCELQ5QJ74 424 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 SNAP47Q5SQN1 464 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 CCNYL2Q5T2Q4 361 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 FKBP10Q96AY3 582 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 UNC93B1Q9H1C4 597 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 MAGEE1Q9HCI5 957 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 FZD1Q9UP38 647 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.5■■□□□ 1.03
SDF4-206ENST00000478938 DDX39AO00148 427 aaKnown RBP21.5■■□□□ 1.03
SDF4-206ENST00000478938 DEAF1O75398 565 aaPredicted RBP21.5■■□□□ 1.03
SDF4-206ENST00000478938 LTFP02788 710 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 JUNBP17275 347 aaPredicted RBP21.5■■□□□ 1.03
SDF4-206ENST00000478938 LIG4P49917 911 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 GTF2BQ00403 316 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 CYBRD1Q53TN4 286 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 SLX4IPQ5VYV7 408 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 LAYNQ6UX15 382 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 KIAA0319LQ8IZA0 1049 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 LGI2Q8N0V4 545 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 DHRSXQ8N5I4 330 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 NRBF2Q96F24 287 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 B3GNT4Q9C0J1 378 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 ILKAPQ9H0C8 392 aaPredicted RBP21.5■■□□□ 1.03
SDF4-206ENST00000478938 PDZD7Q9H5P4 517 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 RETREG1Q9H6L5 497 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 SLCO3A1Q9UIG8 710 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 PCDHA11Q9Y5I1 949 aa21.5■■□□□ 1.03
SDF4-206ENST00000478938 GRID2O43424 1007 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 F7P08709 466 aaPredicted RBP21.49■■□□□ 1.03
SDF4-206ENST00000478938 SPNP16150 400 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 TYK2P29597 1187 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 STX1BP61266 288 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 CRADDP78560 199 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 PCSK7Q16549 785 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 CDONQ4KMG0 1287 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 GLRA4Q5JXX5 417 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 ZNF534Q76KX8 674 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 THNSL1Q8IYQ7 743 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 ELMOD2Q8IZ81 293 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SCML4Q8N228 414 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.49■■□□□ 1.03
SDF4-206ENST00000478938 COQ7Q99807 217 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 DGCR6LQ9BY27 220 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 PLEKHA5Q9HAU0 1116 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 HES2Q9Y543 173 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SPDYE2BA6NHP3 402 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SLC22A2O15244 555 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SPDYE6P0CI01 402 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SLURP2P0DP57 97 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 HTR1BP28222 390 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 TUBA3CQ13748 450 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 TAZQ16635 292 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 SPDYE2Q495Y8 402 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 WDR44Q5JSH3 913 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 DHFR2Q86XF0 187 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 GATA5Q9BWX5 397 aaPredicted RBP21.49■■□□□ 1.03
SDF4-206ENST00000478938 IRF2BPLQ9H1B7 796 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 EPS8L2Q9H6S3 715 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 CD320Q9NPF0 282 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 WDR70Q9NW82 654 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 PAK5Q9P286 719 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 RAD54BQ9Y620 910 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 FOCADQ5VW36 1801 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 PCM1Q15154 2024 aa21.49■■□□□ 1.03
SDF4-206ENST00000478938 TMEM150BA6NC51 233 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ARHGAP33O14559 1287 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 MFN2O95140 757 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 SNAP29O95721 258 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 DLGAP3O95886 979 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ZNF135P52742 658 aaPredicted RBP21.48■■□□□ 1.03
SDF4-206ENST00000478938 GALK2Q01415 458 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 VAC14Q08AM6 782 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 TRAP1Q12931 704 aaKnown RBP21.48■■□□□ 1.03
SDF4-206ENST00000478938 AOC3Q16853 763 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 EXOC8Q8IYI6 725 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 PSMA8Q8TAA3 256 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 MFSD14AQ96MC6 490 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 OR2B2Q9GZK3 357 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 CPNE5Q9HCH3 593 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 MOCS1Q9NZB8 636 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 KIAA1257Q9ULG3 409 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 CDYLQ9Y232 598 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 BOLA1Q9Y3E2 137 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 AHDC1Q5TGY3 1603 aaPredicted RBP21.48■■□□□ 1.03
SDF4-206ENST00000478938 G3V2L1 256 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 HLA-DRAP01903 254 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 CDC20Q12834 499 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ATP6AP1Q15904 470 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 BROXQ5VW32 411 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ANKRD13AQ8IZ07 590 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms