RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 LAYNQ6UX15 382 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 ERN2Q76MJ5 926 aaKnown RBP23.87■■□□□ 1.41
C9orf3-215ENST00000478473 PSTKQ8IV42 348 aaKnown RBP23.87■■□□□ 1.41
C9orf3-215ENST00000478473 MFSD2AQ8NA29 543 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 CAMK1GQ96NX5 476 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 NCAPGQ9BPX3 1015 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 CATSPERBQ9H7T0 1116 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 DONSONQ9NYP3 566 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 HPCAL4Q9UM19 191 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 SCINQ9Y6U3 715 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 EPG5Q9HCE0 2579 aa23.87■■□□□ 1.41
C9orf3-215ENST00000478473 SPAARA0A1B0GVQ0 90 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 H0Y8X5 98 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 GOLGA6L19H0YKK7 550 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 KPNA3O00505 521 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 LEFTY1O75610 366 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 GSRP00390 522 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 SKILP12757 684 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 ITGB7P26010 798 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 CCNHP51946 323 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 ACAP1Q15027 740 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 TRIP6Q15654 476 aaKnown RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 PARP15Q460N3 678 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 CYP4V2Q6ZWL3 525 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 ADAT2Q7Z6V5 191 aaKnown RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 PPP1R16AQ96I34 528 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 SERAC1Q96JX3 654 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 ERVMER34-1Q9H9K5 563 aa23.86■■□□□ 1.41
C9orf3-215ENST00000478473 CNOT8Q9UFF9 292 aaKnown RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 FCF1Q9Y324 198 aaKnown RBP23.86■■□□□ 1.41
C9orf3-215ENST00000478473 A0A1B0GTQ1 180 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 FAM221BA6H8Z2 402 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 ATMINO43313 823 aaPredicted RBP23.85■■□□□ 1.41
C9orf3-215ENST00000478473 PSMA2P25787 234 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 CCT8P50990 548 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 ZNF135P52742 658 aaPredicted RBP23.85■■□□□ 1.41
C9orf3-215ENST00000478473 C21orf59P57076 290 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 SUZ12Q15022 739 aaKnown RBP23.85■■□□□ 1.41
C9orf3-215ENST00000478473 TMEM145Q8NBT3 493 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 ELF4Q99607 663 aaPredicted RBP23.85■■□□□ 1.41
C9orf3-215ENST00000478473 MRPL47Q9HD33 250 aaKnown RBP23.85■■□□□ 1.41
C9orf3-215ENST00000478473 ACTL7AQ9Y615 435 aa23.85■■□□□ 1.41
C9orf3-215ENST00000478473 AP1G1O43747 822 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 DKK1O94907 266 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 NXPH1P58417 271 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 SERINC3Q13530 473 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 POM121L1PQ3SYA9 428 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 SETMARQ53H47 684 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-215ENST00000478473 SLC45A4Q5BKX6 768 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 ERMARDQ5T6L9 678 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 ZSCAN30Q86W11 494 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 DNAAF5Q86Y56 855 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 OR2AP1Q8NGE2 309 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 TRIM7Q9C029 511 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 LRRC19Q9H756 370 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 DYRK4Q9NR20 520 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 AASDHPPTQ9NRN7 309 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 HECAQ9UBI9 543 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-215ENST00000478473 MFHAS1Q9Y4C4 1052 aa23.84■■□□□ 1.41
C9orf3-215ENST00000478473 TMEM131Q92545 1883 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 RASA4BC9J798 803 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 PRAMEF26H0Y7S4 382 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 TLR4O00206 839 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 YKT6O15498 198 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 RASA4O43374 803 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 CREB3O43889 395 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 LRCH4O75427 683 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 RNF8O76064 485 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 GYPCP04921 128 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 SERPING1P05155 500 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 HNRNPH3P31942 346 aaKnown RBP23.83■■□□□ 1.41
C9orf3-215ENST00000478473 PCK1P35558 622 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 RXRGP48443 463 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 HCAR3P49019 387 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 NEK3P51956 506 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 NDST2P52849 883 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 SNRPD1P62314 119 aaKnown RBP23.83■■□□□ 1.41
C9orf3-215ENST00000478473 ZNF284Q2VY69 593 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 TMEM259Q4ZIN3 620 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 RAB44Q7Z6P3 723 aaPredicted RBP23.83■■□□□ 1.41
C9orf3-215ENST00000478473 HORMAD1Q86X24 394 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 GRIN3AQ8TCU5 1115 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 ZNF653Q96CK0 615 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 PEBP4Q96S96 227 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 CDC6Q99741 560 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 AP4E1Q9UPM8 1137 aa23.83■■□□□ 1.41
C9orf3-215ENST00000478473 MAGEC1O60732 1142 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 POP4O95707 220 aaKnown RBP23.82■■□□□ 1.4
C9orf3-215ENST00000478473 MIPP30301 263 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 FOXC1Q12948 553 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 SHBQ15464 509 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 RAB7BQ96AH8 199 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 HMCESQ96FZ2 354 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 SNRNP25Q9BV90 132 aaKnown RBP23.82■■□□□ 1.4
C9orf3-215ENST00000478473 TMEM121BQ9BXQ6 578 aaPredicted RBP23.82■■□□□ 1.4
C9orf3-215ENST00000478473 OSBPL1AQ9BXW6 950 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 KLC2Q9H0B6 622 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 GDF3Q9NR23 364 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 IFNKQ9P0W0 207 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 LUC7L2Q9Y383 392 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms