RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CHAF1AQ13111 956 aaPredicted RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 GRB14Q14449 540 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 KPNB1Q14974 876 aaKnown RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 ETFDHQ16134 617 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 KRT24Q2M2I5 525 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 CCDC57Q2TAC2 916 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 ZNF425Q6IV72 752 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 CCDC144NLQ6NUI1 221 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 PIK3AP1Q6ZUJ8 805 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 RASGRP3Q8IV61 690 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 SUGP1Q8IWZ8 645 aaKnown RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 TRPV1Q8NER1 839 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 OVCA2Q8WZ82 227 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 C18orf8Q96DM3 657 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 ELAC2Q9BQ52 826 aaKnown RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 NUDT22Q9BRQ3 303 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 STK33Q9BYT3 514 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 NUAK2Q9H093 628 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 UBE2ZQ9H832 354 aaPredicted RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 NLRC4Q9NPP4 1024 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 ABHD10Q9NUJ1 306 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 CA14Q9ULX7 337 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 DTNAQ9Y4J8 743 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 DMDP11532 3685 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 TTC3P53804 2025 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 REV3LO60673 3130 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 NCOR2Q9Y618 2525 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 PI4KAP2A4QPH2 592 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 DHHO43323 396 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 PLA2G6O60733 806 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 TOP3BO95985 862 aaKnown RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 DUSP1P28562 367 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 TACR3P29371 465 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 PPP2R1AP30153 589 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 GSTM5P46439 218 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 CDK7P50613 346 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 YPEL5P62699 121 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 GHRHRQ02643 423 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 SEMA3BQ13214 749 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 TRIP6Q15654 476 aaKnown RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 Q4G0T1 1027 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 HERC4Q5GLZ8 1057 aaPredicted RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 DGKKQ5KSL6 1271 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 ARL6IP4Q66PJ3 421 aaKnown RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 PI4KAP1Q8N8J0 262 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 PHOSPHO2Q8TCD6 241 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 PAGR1Q9BTK6 254 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 RNF26Q9BY78 433 aaPredicted RBP5.18□□□□□ -1.58
VPS50-214ENST00000477935 SEZ6LQ9BYH1 1024 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 MYH16Q9H6N6 1097 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 FSCN3Q9NQT6 498 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 SLC39A10Q9ULF5 831 aa5.18□□□□□ -1.58
VPS50-214ENST00000477935 GVINP1Q7Z2Y8 2422 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 RLFQ13129 1914 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 CCDC187A0A096LP49 1063 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 A0A1B0GUL7 405 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 C16orf96A6NNT2 1141 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 J3KTA2 159 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 RRHO14718 337 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ASNSP08243 561 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 IFIT2P09913 472 aaKnown RBP5.17□□□□□ -1.58
VPS50-214ENST00000477935 MATN1P21941 496 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 KCNA5P22460 613 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 MMP8P22894 467 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 MMP13P45452 471 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ACLYP53396 1101 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 BTKQ06187 659 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 CNGA3Q16281 694 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 P3H1Q32P28 736 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 WDR78Q5VTH9 848 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 CCDC30Q5VVM6 783 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ANO1Q5XXA6 986 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 C11orf87Q6NUJ2 197 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 DGLUCYQ7Z3D6 616 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ADHFE1Q8IWW8 467 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 DENND1AQ8TEH3 1009 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ARNTL2Q8WYA1 636 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 GLT1D1Q96MS3 346 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 EIF3CQ99613 913 aaKnown RBP5.17□□□□□ -1.58
VPS50-214ENST00000477935 HELLSQ9NRZ9 838 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 ARL8BQ9NVJ2 186 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 LAS1LQ9Y4W2 734 aaKnown RBP5.17□□□□□ -1.58
VPS50-214ENST00000477935 MROH5Q6ZUA9 1318 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 BRWD1Q9NSI6 2320 aa5.17□□□□□ -1.58
VPS50-214ENST00000477935 FASNP49327 2511 aaKnown RBP5.17□□□□□ -1.58
VPS50-214ENST00000477935 PLXNA1Q9UIW2 1896 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 PRR23AA6NEV1 266 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 PCDH17O14917 1159 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CTIFO43310 598 aaKnown RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 GLP2RO95838 553 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CA3P07451 260 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 MYOGP15173 224 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 IL9P15248 144 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 TMPOP42166 694 aaKnown RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 CFHR1Q03591 330 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 GAB1Q13480 694 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms