RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CDK18Q07002 472 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ZNF177Q13360 481 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 MPP2Q14168 576 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 EFTUD2Q15029 972 aaKnown RBP eCLIP8.06□□□□□ -1.127e-10■■■■■ 36.6
VMA21-203ENST00000477649 MPP7Q5T2T1 576 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ATG16L1Q676U5 607 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 KIAA0930Q6ICG6 404 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 ELMSAN1Q6PJG2 1045 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LVRNQ6Q4G3 990 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 C6orf89Q6UWU4 347 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 CCDC121Q6ZUS5 278 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SPATA21Q7Z572 469 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GALNT7Q86SF2 657 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 RASSF3Q86WH2 238 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 CNTN4Q8IWV2 1026 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TP53INP2Q8IXH6 220 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LRRC34Q8IZ02 419 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LGI2Q8N0V4 545 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 C4orf33Q8N1A6 199 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 OTUD6BQ8N6M0 293 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ZNF557Q8N988 423 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 MGARPQ8TDB4 240 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TCP10LQ8TDR4 215 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GPR152Q8TDT2 470 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LRRN4Q8WUT4 740 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 MRPS31Q92665 395 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 IGSF8Q969P0 613 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TADA1Q96BN2 335 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TRIM43Q96BQ3 446 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 ZNF669Q96BR6 464 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 HMCESQ96FZ2 354 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ABHD8Q96I13 439 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 FEM1CQ96JP0 617 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GCNAQ96QF7 691 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 RAD9AQ99638 391 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GORASP1Q9BQQ3 440 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 FAM167BQ9BTA0 163 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 CEP41Q9BYV8 373 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 PITPNM3Q9BZ71 974 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 KDM4CQ9H3R0 1056 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 CCSER2Q9H7U1 834 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 KLHL14Q9P2G3 628 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 DPP7Q9UHL4 492 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 LSM7Q9UK45 103 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 TBC1D30Q9Y2I9 924 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ARL2BPQ9Y2Y0 163 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 PLLPQ9Y342 182 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ZCWPW2A0A1B0GU75 182 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 CXorf49A8MYA2 514 aaPredicted RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 C2CD2LO14523 706 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TEX28O15482 410 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 KDELR3O43731 214 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 RFPL1O75677 317 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 LRG1P02750 347 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 F11P03951 625 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 FGF1P05230 155 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 HLA-DQB2P05538 268 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 ITGA2BP08514 1039 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TROVE2P10155 538 aaKnown RBP eCLIP8.05□□□□□ -1.12
VMA21-203ENST00000477649 COL6A2P12110 1019 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 ETV4P43268 484 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SERPINH1P50454 418 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 LIMK2P53671 638 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 PRKAA2P54646 552 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 WNT3AP56704 352 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SLC7A9P82251 487 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 PDE1BQ01064 536 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 FPGSQ05932 587 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TWF1Q12792 350 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 ZNF235Q14590 738 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 LRRC14Q15048 493 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 CCDC153Q494R4 210 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 ALFQ53S48 1182 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 FAM133BQ5BKY9 247 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 SPDYAQ5MJ70 313 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SYCP2LQ5T4T6 812 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TEDDM1Q5T9Z0 273 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 RNF43Q68DV7 783 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 NADSYN1Q6IA69 706 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 TRMT10BQ6PF06 316 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 KDELC1Q6UW63 502 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 OTOP3Q7RTS5 596 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TFAP2DQ7Z6R9 452 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 KCNMB4Q86W47 210 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 FAM217AQ8IXS0 508 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 CPXM2Q8N436 756 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 KIAA1958Q8N8K9 716 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 HJURPQ8NCD3 748 aaPredicted RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 IPMKQ8NFU5 416 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 USP13Q92995 863 aaPredicted RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 MRRFQ96E11 262 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 PSKH2Q96QS6 385 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SRPK1Q96SB4 655 aaKnown RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 RBBP8Q99708 897 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 PAIP2Q9BPZ3 127 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms