RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TCAF2A6NFQ2 919 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 CXCL14O95715 111 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 C8AP07357 584 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 RFTN1Q14699 578 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 CCNYQ8ND76 341 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 CHFRQ96EP1 664 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 SENP1Q9P0U3 644 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 GGA2Q9UJY4 613 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 INTS6Q9UL03 887 aaKnown RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 RIMKLBQ9ULI2 386 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 TRAFD1O14545 582 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 USP12O75317 370 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 PAPSS2O95340 614 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 EPOP01588 193 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 NMBRP28336 390 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 GNGT1P63211 74 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 LBRQ14739 615 aaKnown RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 COL19A1Q14993 1142 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 ITIH5Q86UX2 942 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 RUFY1Q96T51 708 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 SLC4A7Q9Y6M7 1214 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 IVLP07476 585 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 SBK3P0C264 359 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 PHBP35232 272 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 CYP4F8P98187 520 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 POLD3Q15054 466 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 TTC19Q6DKK2 380 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ARL14EPQ8N8R7 260 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 CHRAC1Q9NRG0 131 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 KLHL8Q9P2G9 620 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 AAR2Q9Y312 384 aaKnown RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 TCF20Q9UGU0 1960 aaKnown RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 FAM107AO95990 144 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ADH1AP07327 375 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 TAC1P20366 129 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 PACS1Q6VY07 963 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 RSPRY1Q96DX4 576 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ZNF512Q96ME7 567 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
PRPF39-203ENST00000477626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 MAGEB16A2A368 324 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 GRXCR1A8MXD5 290 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 TARM1B6A8C7 271 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 F5H423 210 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 F5H5T6 163 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 PSMD3O43242 534 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 RAMP2O60895 175 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CHRNA4P43681 627 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 SEC24CP53992 1094 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 DSC2Q02487 901 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 IFFO1Q0D2I5 559 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CDH17Q12864 832 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 RNF34Q969K3 372 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CERS2Q96G23 380 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 RBM22Q9NW64 420 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■■■□□ 18.5
PRPF39-203ENST00000477626 HMBSP08397 361 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 EPCAMP16422 314 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 FCARP24071 287 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 RENBPP51606 427 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 SIRPB2Q5JXA9 342 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 KIAA1841Q6NSI8 718 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 C19orf43Q9BQ61 176 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 IL1RAPL1Q9NZN1 696 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CPQQ9Y646 472 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 TLL1O43897 1013 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 STK10O94804 968 aaKnown RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 OR1E1P30953 314 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 NSUN2Q08J23 767 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 SHHQ15465 462 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CCDC149Q6ZUS6 474 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 LRRC6Q86X45 466 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 OR7D4Q8NG98 312 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 PEX13Q92968 403 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 EID2BQ96D98 161 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 MYO19Q96H55 970 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms