RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 EGFL7Q9UHF1 273 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 SFMBT1Q9UHJ3 866 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 CDC14AQ9UNH5 594 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
TPRN-203ENST00000477345 SERPINE1P05121 402 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 PIK3R1P27986 724 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
TPRN-203ENST00000477345 CTAG1AP78358 180 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 BNIP3Q12983 259 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 TUBA3CQ13748 450 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 MAPK11Q15759 364 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 USP41Q3LFD5 358 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 BOLA3Q53S33 107 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 ZBTB49Q6ZSB9 765 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 FRA10AC1Q70Z53 315 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 STRA8Q7Z7C7 330 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 RELL1Q8IUW5 271 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 TTC30BQ8N4P2 665 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
TPRN-203ENST00000477345 C8orf48Q96LL4 319 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 AGAP2Q99490 1192 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 STRA6Q9BX79 667 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
TPRN-203ENST00000477345 PIGNO95427 931 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
TPRN-203ENST00000477345 PTPRAP18433 802 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TPD52P55327 224 aaPredicted RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 TRAF2Q12933 501 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TAS1R3Q7RTX0 852 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 C17orf80Q9BSJ5 609 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 POPDC2Q9HBU9 364 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 ANGPTL3Q9Y5C1 460 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TAF4O00268 1085 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 ITGB3P05106 788 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 CXCL8P10145 99 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 ARRB2P32121 409 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 MOGQ16653 247 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 SMU1Q2TAY7 513 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 PDCD6IPQ8WUM4 868 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 TWNKQ96RR1 684 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TP63Q9H3D4 680 aaPredicted RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 PPCSQ9HAB8 311 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 TMPRSS4Q9NRS4 437 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 CLOCKO15516 846 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TSPAN1O60635 241 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 DGAT1O75907 488 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 KCNH1O95259 989 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 GLULP15104 373 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 GNA12Q03113 381 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 SNX29P2Q8IUI4 249 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 MCPH1Q8NEM0 835 aa13.12□□□□□ -0.31
TPRN-203ENST00000477345 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
TPRN-203ENST00000477345 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.31
TPRN-203ENST00000477345 CCRL2O00421 344 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
TPRN-203ENST00000477345 MAN1A2O60476 641 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 ALDOAP04075 364 aaKnown RBP13.11□□□□□ -0.31
TPRN-203ENST00000477345 ADORA2BP29275 332 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 SDC4P31431 198 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 ACTR2P61160 394 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
TPRN-203ENST00000477345 ZIK1Q3SY52 487 aaPredicted RBP13.11□□□□□ -0.31
TPRN-203ENST00000477345 CDONQ4KMG0 1287 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 TUBA3EQ6PEY2 450 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 ATG14Q6ZNE5 492 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 TMEM192Q8IY95 271 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 LILRA2Q8N149 483 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 SLC15A4Q8N697 577 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 BRSK1Q8TDC3 778 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPRN-203ENST00000477345 SIRPGQ9P1W8 387 aa13.11□□□□□ -0.31
TPRN-203ENST00000477345 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms