RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TCEAL5	Q5H9L2	206 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CBWD3	Q5JTY5	395 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CBWD5	Q5RIA9	395 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CYP4A22	Q5TCH4	519 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC8B1	Q6J4K2	584 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TRIM65	Q6PJ69	517 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TMEM270	Q6UE05	265 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C15orf39	Q6ZRI6	1047 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GAREM2	Q75VX8	874 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TAS1R1	Q7RTX1	841 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VPS36	Q86VN1	386 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TMEM173	Q86WV6	379 aa	Predicted RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SCN4B	Q8IWT1	228 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PDCL2	Q8N4E4	241 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	EFHB	Q8N7U6	833 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ANKRD53	Q8N9V6	530 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LEMD2	Q8NC56	503 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MAFA	Q8NHW3	353 aa	Predicted RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	AUTS2	Q8WXX7	1259 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GOLGA1	Q92805	767 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GFM2	Q969S9	779 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VOPP1	Q96AW1	172 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PABPC5	Q96DU9	382 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CLIP3	Q96DZ5	547 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RPL10L	Q96L21	214 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NECTIN4	Q96NY8	510 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	AGAP2	Q99490	1192 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SEPT5	Q99719	369 aa	Predicted RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CRACR2A	Q9BSW2	395 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PI4K2A	Q9BTU6	479 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LSM14B	Q9BX40	385 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ELOVL4	Q9GZR5	314 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MIS12	Q9H081	205 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CISH	Q9NSE2	258 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PARPBP	Q9NWS1	579 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MTMR10	Q9NXD2	777 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HSFX1	Q9UBD0	423 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UXT	Q9UBK9	157 aa	Predicted RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CACNG4	Q9UBN1	327 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	AFF4	Q9UHB7	1163 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SIX4	Q9UIU6	781 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DNAJC12	Q9UKB3	198 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GTF3C4	Q9UKN8	822 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	L1RE1	Q9UN81	338 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ASB3	Q9Y575	518 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PTPRJ	Q12913	1337 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NLRC5	Q86WI3	1866 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	BRCA2	P51587	3418 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HIDE1	A8MVS5	230 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		F8W810	466 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GABRD	O14764	452 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	THAP12	O43422	761 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TGM5	O43548	720 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RTN3	O95197	1032 aa	Predicted RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VNN1	O95497	513 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PAEP	P09466	180 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LINC00271	P0C7V0	271 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FAM200B	P0CF97	657 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CSH1	P0DML2	217 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CSH2	P0DML3	217 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PTPN2	P17706	415 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RPL17	P18621	184 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC9A1	P19634	815 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ACAT1	P24752	427 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ADORA2B	P29275	332 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HOXA9	P31269	272 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PDE6C	P51160	858 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CLCN4	P51793	760 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CDH8	P55286	799 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ROR1	Q01973	937 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ROM1	Q03395	351 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	IQCB1	Q15051	598 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SOWAHA	Q2M3V2	549 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MDH1B	Q5I0G3	518 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SPOPL	Q6IQ16	392 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PPP1R2P3	Q6NXS1	205 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ANKRD54	Q6NXT1	300 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VSTM1	Q6UX27	236 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PDZD4	Q76G19	769 aa	Predicted RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RRAGA	Q7L523	313 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TADA2B	Q86TJ2	420 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DHX40	Q8IX18	779 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TCEAL8	Q8IYN2	117 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RNF168	Q8IYW5	571 aa	Predicted RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	B3GALNT2	Q8NCR0	500 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	STKLD1	Q8NE28	680 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MYCBPAP	Q8TBZ2	947 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	IPO4	Q8TEX9	1081 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SMG7	Q92540	1137 aa	Known RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GCDH	Q92947	438 aa	Predicted RBP	4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MIEF2	Q96C03	454 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CYFIP2	Q96F07	1278 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SMARCD1	Q96GM5	515 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	B3GALT6	Q96L58	329 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C16orf92	Q96LL3	132 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CEP295NL	Q96MC4	621 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PGLYRP2	Q96PD5	576 aa		4.73	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLITRK1	Q96PX8	696 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms