RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 OXTRP30559 389 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 ACTN2P35609 894 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 GGCXP38435 758 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 AFF3P51826 1226 aaKnown RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 UCNP55089 124 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 BNC1Q01954 994 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 BOLA3Q53S33 107 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 DCAF12L1Q5VU92 463 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 SYT10Q6XYQ8 523 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 POLNQ7Z5Q5 900 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 PYROXD2Q8N2H3 581 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 ALG3Q92685 438 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 BTN2A3PQ96KV6 586 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 GPR174Q9BXC1 333 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 DCLK3Q9C098 648 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 SIK2Q9H0K1 926 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSM2-212ENST00000477182 WSB2Q9NYS7 404 aaPredicted RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 DNAI1Q9UI46 699 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 LSM7Q9UK45 103 aaKnown RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSM2-212ENST00000477182 PCDHA3Q9Y5H8 950 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 HS3ST4Q9Y661 456 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 GOLGA6L7A0A1B0GV03 622 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 A0A1B0GVT2 93 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 E2F8A0AVK6 867 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 METTL12A8MUP2 240 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 GFRA2O00451 464 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 ACSL4O60488 711 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 SLC11A2P49281 568 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 PEX5P50542 639 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 CCT8P50990 548 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 AIF1P55008 147 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 CDH6P55285 790 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 KRT81Q14533 505 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 TEAD4Q15561 434 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 MS4A13Q5J8X5 152 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 PIK3R6Q5UE93 754 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 BROXQ5VW32 411 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 EGFLAMQ63HQ2 1017 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 RAP1GAP2Q684P5 730 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 NADSYN1Q6IA69 706 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 Q6ZNB5 142 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 PSTKQ8IV42 348 aaKnown RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 SPACA3Q8IXA5 215 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 KATNAL2Q8IYT4 538 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 NAT16Q8N8M0 369 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 PSMB7Q99436 277 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 NAPGQ99747 312 aaPredicted RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 CD93Q9NPY3 652 aa11.84□□□□□ -0.51
LSM2-212ENST00000477182 DDX56Q9NY93 547 aaKnown RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 AGO1Q9UL18 857 aaKnown RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 USP9XQ93008 2570 aaPredicted RBP11.84□□□□□ -0.51
LSM2-212ENST00000477182 LRRD1A4D1F6 860 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 CTAGE9A4FU28 777 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 FAM72CH0Y354 149 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 ZNF500O60304 480 aaPredicted RBP11.83□□□□□ -0.52
LSM2-212ENST00000477182 LATS1O95835 1130 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 CD48P09326 243 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 TACR2P21452 398 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 KDELR1P24390 212 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 CASQ1P31415 396 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 SLC6A4P31645 630 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 L1CAMP32004 1257 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 ARSEP51690 589 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 RWDD2BP57060 319 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 TARDBPQ13148 414 aaKnown RBP eCLIP11.83□□□□□ -0.52
LSM2-212ENST00000477182 ZNF211Q13398 564 aaPredicted RBP11.83□□□□□ -0.52
LSM2-212ENST00000477182 AUHQ13825 339 aaKnown RBP11.83□□□□□ -0.52
LSM2-212ENST00000477182 DPYSL2Q16555 572 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 ODF2Q5BJF6 829 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 FAM133BQ5BKY9 247 aaKnown RBP11.83□□□□□ -0.52
LSM2-212ENST00000477182 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 GRAMD4Q6IC98 578 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 C14orf80Q86SX3 495 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 CHSY1Q86X52 802 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 UBE2Q2Q8WVN8 375 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 AZIN2Q96A70 460 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
LSM2-212ENST00000477182 OSBPL2Q9H1P3 480 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 PCED1AQ9H1Q7 454 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 PCDH18Q9HCL0 1135 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 ITM2CQ9NQX7 267 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 SPHK2Q9NRA0 654 aa11.83□□□□□ -0.52
LSM2-212ENST00000477182 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms