RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 WASF2Q9Y6W5 498 aa18.1■□□□□ 0.49
SMIM4-202ENST00000476842 FANCMQ8IYD8 2048 aa18.1■□□□□ 0.49
SMIM4-202ENST00000476842 VPS13AQ96RL7 3174 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CCDC66A2RUB6 948 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 MFSD11O43934 449 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 PALMO75781 387 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 POP4O95707 220 aaKnown RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 PEX11BO96011 259 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CTNNA2P26232 953 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CDKN2BP42772 138 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 PEX5P50542 639 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 RHOAP61586 193 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 RPL6Q02878 288 aaKnown RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 GALNT2Q10471 571 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 SLC10A2Q12908 348 aaPredicted RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 TMCO4Q5TGY1 634 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 FAM124AQ86V42 546 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 TMEFF1Q8IYR6 380 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 HDDC3Q8N4P3 179 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 AADATQ8N5Z0 425 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CADM4Q8NFZ8 388 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 GANCQ8TET4 914 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 UBE2Q2Q8WVN8 375 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 RUBCNQ92622 972 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 KRT35Q92764 455 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 FAM131CQ96AQ9 280 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 ZNF419Q96HQ0 510 aaPredicted RBP18.09■□□□□ 0.49
SMIM4-202ENST00000476842 LRIG1Q96JA1 1093 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 LHX3Q9UBR4 397 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 FZD4Q9ULV1 537 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 GUCA1BQ9UMX6 200 aa18.09■□□□□ 0.49
SMIM4-202ENST00000476842 CHD5Q8TDI0 1954 aa18.08■□□□□ 0.49
SMIM4-202ENST00000476842 A0A1W2PP55 124 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 LEFTY1O75610 366 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 IGSF6O95976 241 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 ACSL1P33121 698 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 DRD3P35462 400 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 GARSP41250 739 aaKnown RBP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 CSNK1DP48730 415 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 MARCKSL1P49006 195 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 GBE1Q04446 702 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 NSUN2Q08J23 767 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 TFDP2Q14188 446 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 LBRQ14739 615 aaKnown RBP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 SPOCD1Q6ZMY3 1216 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 PEX26Q7Z412 305 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 RFX6Q8HWS3 928 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 RYBPQ8N488 228 aaPredicted RBP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 ATPAF2Q8N5M1 289 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 PLD5Q8N7P1 536 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 VOPP1Q96AW1 172 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 RBM41Q96IZ5 413 aaKnown RBP18.08■□□□□ 0.48
SMIM4-202ENST00000476842 GDAP1L1Q96MZ0 367 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 TSGA13Q96PP4 275 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 GPR174Q9BXC1 333 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 PCED1AQ9H1Q7 454 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 DTLQ9NZJ0 730 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 SERGEFQ9UGK8 458 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 GMEB2Q9UKD1 530 aa18.08■□□□□ 0.48
SMIM4-202ENST00000476842 RNF103O00237 685 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 KPNA3O00505 521 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 APOL1O14791 398 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 GFRA3O60609 400 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 EPN2O95208 641 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 MX2P20592 715 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 CCNCP24863 283 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 DHPSP49366 369 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 METAP1P53582 386 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 RWDD2BP57060 319 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 COPS2P61201 443 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 RAD51Q06609 339 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 SLC10A7Q0GE19 358 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 CCDC15Q0P6D6 951 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 TFDP3Q5H9I0 405 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 ATXN7L2Q5T6C5 722 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 TSEN2Q8NCE0 465 aaKnown RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 NSMCE1Q8WV22 266 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 FOXJ1Q92949 421 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 FATE1Q969F0 183 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 CPEB1Q9BZB8 566 aaKnown RBP18.07■□□□□ 0.48
SMIM4-202ENST00000476842 NCDNQ9UBB6 729 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 SEPT3Q9UH03 358 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 PCDHGA5Q9Y5G8 931 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 CAPN6Q9Y6Q1 641 aa18.07■□□□□ 0.48
SMIM4-202ENST00000476842 hCG_1818297A0A087WSY0 165 aa18.06■□□□□ 0.48
SMIM4-202ENST00000476842 MIF4GDA9UHW6 222 aaKnown RBP18.06■□□□□ 0.48
SMIM4-202ENST00000476842 KRIT1O00522 736 aa18.06■□□□□ 0.48
SMIM4-202ENST00000476842 MATN3O15232 486 aa18.06■□□□□ 0.48
SMIM4-202ENST00000476842 SLC7A4O43246 635 aa18.06■□□□□ 0.48
SMIM4-202ENST00000476842 SEMA4FO95754 770 aa18.06■□□□□ 0.48
SMIM4-202ENST00000476842 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
SMIM4-202ENST00000476842 KRT10P13645 584 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms