RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RNF8O76064 485 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 WNT1P04628 370 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TPM1P09493 284 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3HP0C7X1 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 L1CAMP32004 1257 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 CLCN6P51797 869 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 METAP1P53582 386 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 OGDHQ02218 1023 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TRIM14Q14142 442 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 ARTNQ5T4W7 220 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 FAM72AQ5TYM5 149 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 NAPEPLDQ6IQ20 393 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 FAM72DQ6L9T8 149 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 LINGO4Q6UY18 593 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TRIM69Q86WT6 500 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 FAM72BQ86X60 149 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-205ENST00000476387 PIP4K2CQ8TBX8 421 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 ISCUQ9H1K1 167 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 GDF3Q9NR23 364 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 SARDHQ9UL12 918 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 FZD10Q9ULW2 581 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 DMTF1Q9Y222 760 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 WDFY3Q8IZQ1 3526 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 ZFYVE26Q68DK2 2539 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 CREB3O43889 395 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 RAMP2O60895 175 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 MT-CO1P00395 513 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 CAPNS1P04632 268 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 GLDCP23378 1020 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 EPHB2P29323 1055 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 CASP14P31944 242 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 RECQLP46063 649 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-205ENST00000476387 PPP2CBP62714 309 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 PPP2CAP67775 309 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 AGBL4Q5VU57 503 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 SPECC1LQ69YQ0 1117 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 C22orf39Q6P5X5 142 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 TMPRSS7Q7RTY8 843 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 PRPF39Q86UA1 669 aaKnown RBP16.52■□□□□ 0.24
COL1A1-205ENST00000476387 IQCHQ86VS3 1027 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 NLRP14Q86W24 1093 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 ZNF354CQ86Y25 554 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 MFSD2AQ8NA29 543 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 ERVMER34-1Q9H9K5 563 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 PREBQ9HCU5 417 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 ARHGAP20Q9P2F6 1191 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 HPCAL4Q9UM19 191 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 NEU3Q9UQ49 428 aa16.52■□□□□ 0.24
COL1A1-205ENST00000476387 ACACAQ13085 2346 aa16.52■□□□□ 0.23
COL1A1-205ENST00000476387 DSPP15924 2871 aaKnown RBP16.52■□□□□ 0.23
COL1A1-205ENST00000476387 TMEM191CA6NGB0 347 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 TLR4O00206 839 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 WNT9AO14904 365 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 ARRB1P49407 418 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-205ENST00000476387 SERPINH1P50454 418 aaKnown RBP16.51■□□□□ 0.23
COL1A1-205ENST00000476387 GEMIN4P57678 1058 aaKnown RBP16.51■□□□□ 0.23
COL1A1-205ENST00000476387 NXPH1P58417 271 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 IL9RQ01113 521 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 SLC20A2Q08357 652 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 CCDC15Q0P6D6 951 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 CNTN1Q12860 1018 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 OVGP1Q12889 678 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 OXR1Q8N573 874 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 TMIEQ8NEW7 156 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 NCAPGQ9BPX3 1015 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 MAGEH1Q9H213 219 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 CATSPERBQ9H7T0 1116 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 NDFIP2Q9NV92 336 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 FTSJ1Q9UET6 329 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 AP4E1Q9UPM8 1137 aa16.51■□□□□ 0.23
COL1A1-205ENST00000476387 KNTC1P50748 2209 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 GOLGA4Q13439 2230 aaKnown RBP16.5■□□□□ 0.23
COL1A1-205ENST00000476387 APC2O95996 2303 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PTPRBP23467 1997 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 K7ERQ8 282 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PLK4O00444 970 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 CHRNA3P32297 505 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 HTR7P34969 479 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 ACVRL1P37023 503 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 RXRGP48443 463 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 TPI1P60174 286 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 POLD3Q15054 466 aaPredicted RBP16.5■□□□□ 0.23
COL1A1-205ENST00000476387 SHBQ15464 509 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 NEK5Q6P3R8 708 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PROSER1Q86XN7 944 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PCDH20Q8N6Y1 951 aaKnown RBP16.5■□□□□ 0.23
COL1A1-205ENST00000476387 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms