RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 CCDC157Q569K6 752 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 NLRP14Q86W24 1093 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 PHF13Q86YI8 300 aaPredicted RBP10.1□□□□□ -0.79
PTPN7-208ENST00000476061 SLC25A45Q8N413 288 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 OR4C6Q8NH72 309 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
PTPN7-208ENST00000476061 FEM1CQ96JP0 617 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 LENG8Q96PV6 779 aaPredicted RBP10.1□□□□□ -0.79
PTPN7-208ENST00000476061 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 TNKS2Q9H2K2 1166 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 ZFR2Q9UPR6 939 aaKnown RBP10.1□□□□□ -0.79
PTPN7-208ENST00000476061 SIK3Q9Y2K2 1263 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 FADS3Q9Y5Q0 445 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 WDFY3Q8IZQ1 3526 aa10.1□□□□□ -0.79
PTPN7-208ENST00000476061 CEP295Q9C0D2 2601 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 NEMP2A6NFY4 417 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 ZSCAN5CA6NGD5 496 aaPredicted RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 LRRC10BA6NIK2 292 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 A6NNZ2 444 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 TSPAN6O43657 245 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 PIAS2O75928 621 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 LRIG2O94898 1065 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 GSRP00390 522 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 GIMD1P0DJR0 217 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 KRT3P12035 628 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 PRLRP16471 622 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 DGKAP23743 735 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 NSFP46459 744 aaKnown RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 AIF1P55008 147 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 HDAC4P56524 1084 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 SNRPD1P62314 119 aaKnown RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 TARDBPQ13148 414 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 CDO1Q16878 200 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 C15orf59Q2T9L4 293 aaPredicted RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 COL28A1Q2UY09 1125 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 CCDC183Q5T5S1 534 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 HES3Q5TGS1 186 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 KYAT3Q6YP21 454 aaKnown RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 GCNT7Q6ZNI0 430 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 PDZD3Q86UT5 571 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 MARCH9Q86YJ5 346 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 DRC7Q8IY82 874 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 C3orf20Q8ND61 904 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 ANKRD20A12PQ8NF67 263 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 OR13H1Q8NG92 308 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 OR2AP1Q8NGE2 309 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 JOSD2Q8TAC2 188 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 GRIN3AQ8TCU5 1115 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 CASKIN2Q8WXE0 1202 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 TBC1D31Q96DN5 1066 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 BMFQ96LC9 184 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 C11orf70Q9BRQ4 267 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 OSBPL1AQ9BXW6 950 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 NLRC4Q9NPP4 1024 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 FAM207AQ9NSI2 230 aaPredicted RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 FANCLQ9NW38 375 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 HECAQ9UBI9 543 aaPredicted RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
PTPN7-208ENST00000476061 HPCAL4Q9UM19 191 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 NEU3Q9UQ49 428 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 CA5BQ9Y2D0 317 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 IGF2RP11717 2491 aa10.09□□□□□ -0.79
PTPN7-208ENST00000476061 SPTY2D1-AS1A0A0U1RR47 76 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 TCRBV5S1A1TA0A578 114 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 SIGLEC16A6NMB1 481 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 TRIM38O00635 465 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 EPHB6O15197 1021 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 SIGLEC6O43699 453 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 KDELR3O43731 214 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 RAMP2O60895 175 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 SDC3O75056 442 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 POP4O95707 220 aaKnown RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 PAK4O96013 591 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 CALB1P05937 261 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 GP1BAP07359 652 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 PLEKP08567 350 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 ALPPL2P10696 532 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 CKMT1AP12532 417 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 GPD1P21695 349 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 RFC1P35251 1148 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 ACVRL1P37023 503 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 RABIFP47224 123 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 KLK7P49862 253 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 COPB1P53618 953 aaKnown RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 YBEYP58557 167 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 HNRNPKP61978 463 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 INSM1Q01101 510 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 POLD3Q15054 466 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 RAB6CQ53S08 254 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 INO80DQ53TQ3 878 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-208ENST00000476061 ZNF805Q5CZA5 627 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 SEL1L3Q68CR1 1132 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 C19orf48Q6RUI8 117 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 Q6ZSR6 202 aa10.08□□□□□ -0.8
PTPN7-208ENST00000476061 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms