RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CENPIQ92674 756 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 MS4A14Q96JA4 679 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 RPRD1AQ96P16 312 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 FAM129BQ96TA1 746 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 TKTL2Q9H0I9 626 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 PABPC3Q9H361 631 aaKnown RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 FSCN3Q9NQT6 498 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 IGLV3-10A0A075B6K4 115 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 UQCRHLA0A096LP55 91 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 EDDM13A0A1B0GTR0 161 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 A0A1B0GTW7 788 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 KRIT1O00522 736 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 DNTTP04053 509 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 UQCRHP07919 91 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 PYGMP11217 842 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 CEACAM1P13688 526 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 GNSP15586 552 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 PMLP29590 882 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 GJC1P36383 396 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 GGCXP38435 758 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 AIF1P55008 147 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 CDH4P55283 916 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 SLC25A11Q02978 314 aaKnown RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 DEUP1Q05D60 604 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 ZNF211Q13398 564 aaPredicted RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 C15orf59Q2T9L4 293 aaPredicted RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 PIP4P1Q86T03 277 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 PSTKQ8IV42 348 aaKnown RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 RGL4Q8IZJ4 473 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 FRS2Q8WU20 508 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 RPL10LQ96L21 214 aaKnown RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 FEM1AQ9BSK4 669 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 BTBD1Q9H0C5 482 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 C6orf106Q9H6K1 298 aaPredicted RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 SGK2Q9HBY8 427 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 HOMER3Q9NSC5 361 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 DNAAF2Q9NVR5 837 aaKnown RBP15.97■□□□□ 0.15
CPSF3-203ENST00000475482 EFR3BQ9Y2G0 817 aa15.97■□□□□ 0.15
CPSF3-203ENST00000475482 EPG5Q9HCE0 2579 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 MEI4A8MW99 385 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 PDE2AO00408 941 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ATP9BO43861 1147 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 CNTN5O94779 1100 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 TUBBP07437 444 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 SYPP08247 313 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 PTPN7P35236 360 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 MAPK8P45983 427 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 STK19P49842 368 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 PDK2Q15119 407 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 TTC31Q49AM3 519 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 GLE1Q53GS7 698 aaKnown RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 TFDP3Q5H9I0 405 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 TEX35Q5T0J7 233 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 SCYL2Q6P3W7 929 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 FAM124AQ86V42 546 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 VSIG1Q86XK7 387 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 CPNE8Q86YQ8 564 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 SLC13A5Q86YT5 568 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 MMGT1Q8N4V1 131 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 KCTD6Q8NC69 237 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 FAM131CQ96AQ9 280 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 RUNDC3BQ96NL0 473 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 HAPLN3Q96S86 360 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ORAI3Q9BRQ5 295 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ZDHHC5Q9C0B5 715 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 SIK2Q9H0K1 926 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ZWILCHQ9H900 591 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 TMPRSS4Q9NRS4 437 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ZNF212Q9UDV6 495 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 PCSK1NQ9UHG2 260 aa15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-203ENST00000475482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.95■□□□□ 0.14
CPSF3-203ENST00000475482 LRRD1A4D1F6 860 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 GIPC1O14908 333 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 BCAT2O15382 392 aaPredicted RBP15.95■□□□□ 0.14
CPSF3-203ENST00000475482 TJP3O95049 919 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SEMA4FO95754 770 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 NOVA1P51513 510 aaKnown RBP15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SHC2P98077 582 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF177Q13360 481 aaPredicted RBP15.95■□□□□ 0.14
CPSF3-203ENST00000475482 CST6Q15828 149 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 ALFQ53S48 1182 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 ERMARDQ5T6L9 678 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SH3PXD2AQ5TCZ1 1133 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 PSAPL1Q6NUJ1 521 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 MINDY1Q8N5J2 469 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 ARFGAP1Q8N6T3 406 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 FBXL12Q9NXK8 326 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SERGEFQ9UGK8 458 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 EIF2B4Q9UI10 523 aaKnown RBP15.95■□□□□ 0.14
CPSF3-203ENST00000475482 FZD4Q9ULV1 537 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SNX10Q9Y5X0 201 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 SLCO1B1Q9Y6L6 691 aa15.95■□□□□ 0.14
CPSF3-203ENST00000475482 MAP1BP46821 2468 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 CEP295Q9C0D2 2601 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF487B1APH4 448 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 RNASEH1O60930 286 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 CD59P13987 128 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms