RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 OPA1O60313 960 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CSO75390 466 aaKnown RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 PCDH8O95206 1070 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 SMC2O95347 1197 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CALCAP01258 141 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GP1BAP07359 652 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 TNNT1P13805 278 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 HNRNPA2B1P22626 353 aaKnown RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 RBMS1P29558 406 aaKnown RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CDC25BP30305 580 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GPD2P43304 727 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 LSSP48449 732 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 PLK1P53350 603 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 KRT83P78385 493 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CDK17Q00537 523 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GCNT1Q02742 428 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 PNOCQ13519 176 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CXorf57Q6NSI4 855 aaKnown RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 SH2D3CQ8N5H7 860 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 IFI44Q8TCB0 444 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 MAPK15Q8TD08 544 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 STK32AQ8WU08 396 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 KLK6Q92876 244 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 KAT5Q92993 513 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 SMARCE1Q969G3 411 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 FAM131CQ96AQ9 280 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CCDC97Q96F63 343 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 WBP1Q96G27 269 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 PPP1R16AQ96I34 528 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 HIC2Q96JB3 615 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 APOLD1Q96LR9 279 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GSDMAQ96QA5 445 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 ZSWIM1Q9BR11 485 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 FEM1AQ9BSK4 669 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GOLPH3LQ9H4A5 285 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 POLR1BQ9H9Y6 1135 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 USP29Q9HBJ7 922 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 FZD3Q9NPG1 666 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 UCKL1Q9NWZ5 548 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 DDIT4Q9NX09 232 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 DNAJC28Q9NX36 388 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 NLGN3Q9NZ94 848 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 NCKIPSDQ9NZQ3 722 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 VANGL2Q9ULK5 521 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CA5BQ9Y2D0 317 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CFAP46Q8IYW2 2715 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 HELZ2Q9BYK8 2649 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 A6NNZ2 444 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 B8ZZF3 427 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 H3BM21 787 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 SCAMP1O15126 338 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PMM2O15305 246 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 P4HA2O15460 535 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 THAP12O43422 761 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CLDN11O75508 207 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PIAS2O75928 621 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 IGLV3-25P01717 112 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PRNPP04156 253 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 GNA15P30679 374 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CHRNA3P32297 505 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 RPL34P49207 117 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CLDN2P57739 230 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 TAS2R38P59533 333 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 HNRNPKP61978 463 aaKnown RBP eCLIP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CENPCQ03188 943 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 VAC14Q08AM6 782 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 NME3Q13232 169 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 AUHQ13825 339 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 TPD52L1Q16890 204 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF284Q2VY69 593 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 COBLL1Q53SF7 1204 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF542PQ5EBM4 170 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 C3orf38Q5JPI3 329 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 EFHC1Q5JVL4 640 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PIP5KL1Q5T9C9 394 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CDCP2Q5VXM1 449 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 ZCCHC8Q6NZY4 707 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 FBXL22Q6P050 247 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 DENND1BQ6P3S1 775 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 FOXR1Q6PIV2 292 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PCSK4Q6UW60 755 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 LEKR1Q6ZMV7 388 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 Q6ZSR6 202 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PTAR1Q7Z6K3 402 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 TMEM110Q86TL2 294 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 HORMAD1Q86X24 394 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 DCP2Q8IU60 420 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 FAM181AQ8N9Y4 354 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 RNF214Q8ND24 703 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 OR13H1Q8NG92 308 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 FAM174AQ8TBP5 190 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 IFT43Q96FT9 208 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 CEP63Q96MT8 703 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 PRMT1Q99873 361 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 KCND1Q9NSA2 647 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms