RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PARD3Q8TEW0 1356 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 ALS2Q96Q42 1657 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 NPHP3-ACAD11A0A0J9YXS1 232 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 FAM237BA0A1B0GVD1 139 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 UBA6A0AVT1 1052 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 FRMD3A2A2Y4 597 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 FOXO6A8MYZ6 492 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 KPNA7A9QM74 516 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 E9PBE3 544 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 PPEF2O14830 753 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ANGPT2O15123 496 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 TO15178 435 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 NKRFO15226 690 aaKnown RBP eCLIP6.15□□□□□ -1.42
RTF1-203ENST00000473214 MAPK13O15264 365 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 BCAT2O15382 392 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 RASSF9O75901 435 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 PTBP3O95758 552 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 EIF2S1P05198 315 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 FYNP06241 537 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 DLATP10515 647 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 ETS1P14921 441 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ERCC2P18074 760 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CASTP20810 708 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 MALP21145 153 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ALDH4A1P30038 563 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CCR1P32246 355 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 NTF4P34130 210 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MSX2P35548 267 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 TAGLN2P37802 199 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 ABCG1P45844 678 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 GALK1P51570 392 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 VCPP55072 806 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 STX1BP61266 288 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 RPL7AP62424 266 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 PPP3CAQ08209 521 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 IKZF1Q13422 519 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 GPM6BQ13491 265 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 THOC5Q13769 683 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 NFIXQ14938 502 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CLCA4Q14CN2 919 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 NKPD1Q17RQ9 610 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CFAP221Q4G0U5 840 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 LIPMQ5VYY2 423 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CST9LP1Q5W188 147 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MBLAC2Q68D91 279 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 KCNV1Q6PIU1 500 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CRTC3Q6UUV7 619 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 SLC36A4Q6YBV0 504 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CEP128Q6ZU80 1094 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ERN2Q76MJ5 926 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 UBE3DQ7Z6J8 389 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MIB1Q86YT6 1006 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 DNAJC10Q8IXB1 793 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 BBS5Q8N3I7 341 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 SLC15A4Q8N697 577 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD44Q8N8A2 993 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ATAD1Q8NBU5 361 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 OR52M1Q8NGK5 317 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 DNAJB8Q8NHS0 232 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 ZCCHC10Q8TBK6 192 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 SH3RF2Q8TEC5 729 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 SAT2Q96F10 170 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 PRICKLE1Q96MT3 831 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 NR1H4Q96RI1 486 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 MIPEPQ99797 713 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 CCDC77Q9BR77 488 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 RIOK1Q9BRS2 568 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 SIKE1Q9BRV8 207 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 PIMREGQ9BSJ6 248 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MLPHQ9BV36 600 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 CACNG6Q9BXT2 260 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 FOXP3Q9BZS1 431 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 TTYH1Q9H313 450 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 WDR26Q9H7D7 661 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 SSU72Q9NP77 194 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 FAM114A2Q9NRY5 505 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 TBC1D7Q9P0N9 293 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MAD2L2Q9UI95 211 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 SLCO3A1Q9UIG8 710 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 MBD1Q9UIS9 605 aaPredicted RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 USP18Q9UMW8 372 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.15□□□□□ -1.42
RTF1-203ENST00000473214 DDX49Q9Y6V7 483 aaKnown RBP6.15□□□□□ -1.42
RTF1-203ENST00000473214 PEAK1Q9H792 1746 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 IFT172Q9UG01 1749 aa6.15□□□□□ -1.42
RTF1-203ENST00000473214 FAM205AQ6ZU69 1335 aa6.15□□□□□ -1.43
RTF1-203ENST00000473214 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
RTF1-203ENST00000473214 VPS8Q8N3P4 1428 aa6.15□□□□□ -1.43
RTF1-203ENST00000473214 DLC1Q96QB1 1528 aa6.15□□□□□ -1.43
RTF1-203ENST00000473214 MBD3L4A6NDZ8 208 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 MBD3L3A6NE82 208 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 TMEM233B4DJY2 109 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 FAM86B1E9PN63 330 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CXCL11O14625 94 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 RASGRF2O14827 1237 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 KCNQ3O43525 872 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SIGLEC6O43699 453 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms